File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/9009e2ea2798c5c675e17b418701bb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mxddppxy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:17,635 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:18,469 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:18,634 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:19,543 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:19,702 - cnv_pipe.batch.run_model - INFO - Processing cluster 825 with 164 probes
2026-06-04 17:23:20,064 - cnv_pipe.batch.run_model.cluster825 - INFO - Child process started for cluster 825 with 164 probes
2026-06-04 17:24:08,016 - cnv_pipe.batch.run_model.cluster825 - INFO - Child process finished cluster 825. Wrote cluster_825_samples.csv and cluster_825_params.csv
2026-06-04 17:24:08,017 - cnv_pipe.batch.run_model - INFO - Cluster 825 finished in 48.32 seconds. Status: SUCCESS