File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/9f8523492a73eaf2050b4a854e84a3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5sink7qy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:24:34,724 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:24:35,583 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:24:35,755 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:24:36,714 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:24:36,797 - cnv_pipe.batch.run_model - INFO - Processing cluster 1153 with 193 probes
2026-06-04 17:24:37,277 - cnv_pipe.batch.run_model.cluster1153 - INFO - Child process started for cluster 1153 with 193 probes
2026-06-04 17:25:34,233 - cnv_pipe.batch.run_model.cluster1153 - INFO - Child process finished cluster 1153. Wrote cluster_1153_samples.csv and cluster_1153_params.csv
2026-06-04 17:25:34,234 - cnv_pipe.batch.run_model - INFO - Cluster 1153 finished in 57.44 seconds. Status: SUCCESS