File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/d36d8433c1b49ba85e3d26e93c21a8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-w1sugmsu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:43,575 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:44,526 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:44,719 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:45,727 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:45,803 - cnv_pipe.batch.run_model - INFO - Processing cluster 951 with 198 probes
2026-06-04 17:23:46,336 - cnv_pipe.batch.run_model.cluster951 - INFO - Child process started for cluster 951 with 198 probes
2026-06-04 17:24:52,656 - cnv_pipe.batch.run_model.cluster951 - INFO - Child process finished cluster 951. Wrote cluster_951_samples.csv and cluster_951_params.csv
2026-06-04 17:24:52,657 - cnv_pipe.batch.run_model - INFO - Cluster 951 finished in 66.85 seconds. Status: SUCCESS