File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/38f30fa78d743a91649670bd14595f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p1_znqyf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:15,876 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:16,686 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:16,857 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:17,761 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:17,931 - cnv_pipe.batch.run_model - INFO - Processing cluster 819 with 198 probes
2026-06-04 17:23:18,339 - cnv_pipe.batch.run_model.cluster819 - INFO - Child process started for cluster 819 with 198 probes
2026-06-04 17:24:15,383 - cnv_pipe.batch.run_model.cluster819 - INFO - Child process finished cluster 819. Wrote cluster_819_samples.csv and cluster_819_params.csv
2026-06-04 17:24:15,384 - cnv_pipe.batch.run_model - INFO - Cluster 819 finished in 57.45 seconds. Status: SUCCESS