File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/35e499adae3e4e7aa9eb7fa11326a5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-96b2q2d2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:24:35,892 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:24:36,680 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:24:36,841 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:24:37,782 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:24:37,930 - cnv_pipe.batch.run_model - INFO - Processing cluster 1247 with 164 probes
2026-06-04 17:24:38,303 - cnv_pipe.batch.run_model.cluster1247 - INFO - Child process started for cluster 1247 with 164 probes
2026-06-04 17:25:24,698 - cnv_pipe.batch.run_model.cluster1247 - INFO - Child process finished cluster 1247. Wrote cluster_1247_samples.csv and cluster_1247_params.csv
2026-06-04 17:25:24,699 - cnv_pipe.batch.run_model - INFO - Cluster 1247 finished in 46.77 seconds. Status: SUCCESS