File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/be63edc1322a84fc2e0ade67a5ce3d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-efw5rwv3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:24:06,893 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:24:07,681 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:24:07,838 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:24:08,775 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:24:08,953 - cnv_pipe.batch.run_model - INFO - Processing cluster 1083 with 134 probes
2026-06-04 17:24:09,336 - cnv_pipe.batch.run_model.cluster1083 - INFO - Child process started for cluster 1083 with 134 probes
2026-06-04 17:24:48,556 - cnv_pipe.batch.run_model.cluster1083 - INFO - Child process finished cluster 1083. Wrote cluster_1083_samples.csv and cluster_1083_params.csv
2026-06-04 17:24:48,557 - cnv_pipe.batch.run_model - INFO - Cluster 1083 finished in 39.60 seconds. Status: SUCCESS