.command.err - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr6_138229684-138229952.bed)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/7ed58e6cd13a5ce32d1a69da085f5a/.command.err
Size: 100.8 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr6_138229684-138229952.bed)
Attempt
Content

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXKUsk25/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXKUsk25/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXKUsk25/chr6_138229684-138229952.bed.gz.tbi
[2026-06-04T17:18:58.866184Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:18:58.866855Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:18:58.866870Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:18:58.866875Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:18:58.866880Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXKUsk25'
[2026-06-04T17:18:58.866884Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:18:58.866891Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:18:58.866895Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:18:58.866900Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T17:18:58.866904Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:18:58.866909Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:18:58.866913Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:18:58.866918Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:18:58.866922Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:18:58.867413Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:18:58.867543Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:18:58.873491Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:18:58.874168Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:18:58.874371Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:18:58.874634Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:18:58.874890Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.875415Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.875513Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.875589Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.875716Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.875786Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.875947Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.876059Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.876537Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.876692Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.876779Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.876919Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.877323Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.879350Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.879945Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:18:58.880129Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.880500Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.880575Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.880692Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.880756Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.880952Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881020Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881131Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881198Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881307Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881377Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881677Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.881941Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882058Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882125Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882232Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882299Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882418Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882481Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882591Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882653Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882765Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882830Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.882984Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.883219Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.883587Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.883654Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.883766Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.883831Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.883976Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884042Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884154Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884219Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884409Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884475Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884604Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.884873Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885348Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885414Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885523Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885585Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885695Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885758Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885864Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.885926Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.886035Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.886098Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.886208Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.886277Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.886583Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887033Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887143Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887204Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887321Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887402Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887522Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887590Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887698Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.887765Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.889341Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.889977Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890105Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890175Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890288Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890351Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890460Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890522Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890634Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890698Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890808Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.890876Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.891119Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.891750Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.891872Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.891938Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892056Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892124Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892233Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892298Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892412Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892478Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892624Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892696Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.892994Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.893704Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.893873Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.893940Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894056Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894120Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894231Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894319Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894429Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894494Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894603Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.894672Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.897170Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.897857Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.898147Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.898218Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.912116Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.912782Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.913007Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.913170Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.914253Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.914414Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.914487Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.915067Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.915311Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.915568Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.916297Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.916647Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.916929Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.917678Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:18:58.918098Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.918914Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:18:58.919182Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.920415Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.921319Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:18:58.924352Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:18:58.927624Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:18:58.933052Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:18:58.938130Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:18:58.940258Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:18:58.941020Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:18:58.943756Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:18:59.056515Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.056598Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.057714Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.058019Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.061670Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:18:59.062426Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:18:59.773111Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:18:59.774858Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.776123Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.778801Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:18:59.890485Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.891749Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.894543Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:18:59.955877Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.957010Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.960056Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:18:59.972947Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.974209Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:59.977178Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:19:00.038310Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.039501Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.042142Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:19:00.103628Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.104805Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.107298Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:19:00.136771Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.137888Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.140719Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:19:00.252083Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.253460Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.256843Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:19:00.317955Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.319544Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.319862Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.322043Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:19:00.322384Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.325006Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:19:00.386318Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.386407Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.387493Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.387751Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.390754Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:19:00.392142Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:19:00.652508Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.653669Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.656544Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:19:00.717828Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.719002Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.721997Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:19:00.883620Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.884829Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.887593Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:19:00.948982Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.950114Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.953047Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:19:00.966135Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.967178Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:00.969839Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:19:00.999114Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.000224Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.002913Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:19:01.008113Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.009056Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.011954Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:19:01.073240Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.074307Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.077338Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:19:01.138566Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.138663Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.139723Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.140195Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.143783Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:19:01.144860Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:19:01.204850Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.204947Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.205971Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.206302Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.209492Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:19:01.238943Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:19:01.271145Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.271230Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.272195Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.272504Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.275402Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:19:01.276160Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:19:01.336801Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.337899Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.340645Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:19:01.602619Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.603719Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.606535Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:19:01.667816Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.667907Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.668846Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.669178Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.671816Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:19:01.672826Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:19:01.701398Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.702327Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.705079Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:19:01.706024Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.706788Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.709183Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:19:01.921395Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.922449Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.925359Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:19:01.986604Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.987608Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:01.990479Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:19:02.152229Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.152332Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.153293Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.153609Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.156219Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:19:02.157177Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:19:02.187018Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.187099Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.188258Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.188570Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.191468Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:19:02.192743Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:19:02.220464Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.221314Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.224147Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:19:02.335680Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.336989Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.339906Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:19:02.401175Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.401274Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.402164Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.402736Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.405652Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:19:02.406393Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:19:02.435923Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.436015Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.436888Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.437223Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.439969Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:19:02.440606Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:19:02.453910Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.454725Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.457435Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:19:02.470622Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.470687Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.471455Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.471749Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.474606Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:19:02.475572Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:19:02.487808Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.488621Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.490957Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:19:02.504326Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.505064Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.507780Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:19:02.520807Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.521535Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.524083Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:19:02.529316Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.530066Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.532668Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:19:02.537779Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.538558Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.540956Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:19:02.554340Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.555101Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.557392Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:19:02.562721Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.562787Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.563511Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.563796Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.566337Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:19:02.567201Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:19:02.580590Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.581587Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.584000Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:19:02.589290Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.590039Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.592765Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:19:02.593608Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.594333Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.596908Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:19:02.626281Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.627062Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.629447Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:19:02.659075Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.659900Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.662598Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:19:02.691876Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.692702Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.695552Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:19:02.708589Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.709334Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.711946Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:19:02.725191Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.725961Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.728350Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:19:02.758131Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.758934Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.761945Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:19:02.823339Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.824207Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.826848Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:19:02.888343Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.888436Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.889191Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.889605Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.892532Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:19:02.893752Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:19:02.923111Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.923891Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:02.926684Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:19:03.038363Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.039188Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.041865Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:19:03.071069Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.071841Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.074561Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:19:03.537198Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.538141Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.540982Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:19:03.953252Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.953974Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.956079Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.956978Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:19:03.957434Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.957660Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.958784Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:03.961299Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:19:03.962335Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:19:04.074335Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.075133Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.077854Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:19:04.107231Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.108044Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.110971Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:19:04.123836Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.124504Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.127284Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:19:04.188620Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.188716Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.189459Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.189796Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.192575Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:19:04.193875Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:19:04.221825Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.221920Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.222577Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.222854Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.225635Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:19:04.226665Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:19:04.254992Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.255061Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.255652Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.255936Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.258906Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:19:04.259918Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:19:04.288177Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.288861Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.290858Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.291602Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.291828Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:19:04.294393Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:19:04.323806Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.323894Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.324645Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.325070Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.328042Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:19:04.329207Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:19:04.357393Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.357464Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.358068Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.358385Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.360984Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:19:04.362022Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:19:04.390370Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.390454Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.391039Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.391512Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.394744Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:19:04.395618Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.396015Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:19:04.396440Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.398951Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:19:04.428272Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.428338Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.428881Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.429130Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.431700Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:19:04.458218Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:19:04.461020Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.461075Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.461594Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.462089Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.464730Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:19:04.465692Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:19:04.494310Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.494388Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.494914Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.497383Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:19:04.526769Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.590938Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.591512Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.594122Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:19:04.623824Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.988851Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.989455Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:19:04.992152Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:19:05.021739Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.086056Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.086650Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.089413Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:19:05.118822Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.183070Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.183668Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.186105Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:19:05.215593Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.216154Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.216746Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.219233Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:19:05.250416Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.515187Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.515795Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.518542Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:19:05.547774Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.548146Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.548311Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.548597Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.549085Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.554018Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:19:05.554757Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:19:05.579019Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:19:05.581387Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.581634Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.583557Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.583813Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.584067Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:19:05.585674Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.586210Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:19:05.617407Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.617480Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.617660Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:19:05.620036Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:19:05.649576Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:19:09.472794Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:19:17.755402Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:19:17.755402Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] 
[2026-06-04T17:19:17.755402Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:19:17.755507Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] 
[2026-06-04T17:19:17.755515Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:19:17.755522Z] [nf-5f7ed58e6cd13a5ce32d1a69da085f5a-9dc33-8nw94] [577_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec