mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9x_nicfr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:06,419 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:07,722 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:08,013 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:09,698 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:09,805 - cnv_pipe.batch.run_model - INFO - Processing cluster 739 with 193 probes
2026-06-04 17:23:10,551 - cnv_pipe.batch.run_model.cluster739 - INFO - Child process started for cluster 739 with 193 probes
2026-06-04 17:24:40,673 - cnv_pipe.batch.run_model.cluster739 - INFO - Child process finished cluster 739. Wrote cluster_739_samples.csv and cluster_739_params.csv
2026-06-04 17:24:40,675 - cnv_pipe.batch.run_model - INFO - Cluster 739 finished in 90.87 seconds. Status: SUCCESS