[2026-06-04T17:18:47.805482Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:18:47.806679Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:18:47.806700Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:18:47.806705Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:18:47.806710Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX9Nfdom'
[2026-06-04T17:18:47.806714Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:18:47.806719Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:18:47.806723Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:18:47.806727Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-04T17:18:47.806730Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:18:47.806734Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:18:47.806738Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:18:47.806741Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:18:47.806745Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:18:47.807497Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:18:47.807590Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:18:47.813350Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:18:47.813969Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:18:47.814357Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:18:47.814595Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:18:47.815210Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.816249Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.816576Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.816698Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.816907Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.816982Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.817062Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.817512Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.817657Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.817856Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.817956Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.819527Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.819876Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.820097Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:18:47.820440Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.820548Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.820926Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821105Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821421Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821489Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821697Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821772Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821890Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.821959Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822076Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822140Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822254Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822317Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822601Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822815Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.822947Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823024Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823133Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823194Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823301Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823365Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823476Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823538Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823647Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823704Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823827Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.823924Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824369Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824435Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824541Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824601Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824712Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824773Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824931Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.824993Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.825098Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.825160Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.825266Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.825516Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.825923Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.825984Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840016Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840125Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840209Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840392Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840480Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840585Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840664Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840770Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840838Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:18:47.840888Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:18:47.848902Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.849438Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.849990Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.851993Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.852368Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:18:47.854233Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-04T17:18:47.854573Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.856261Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.857019Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.857595Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.857852Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-04T17:18:47.860084Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.864144Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-04T17:18:47.866845Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:18:47.868473Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-04T17:18:47.870499Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-04T17:18:47.871689Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-04T17:18:47.925052Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.925682Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:47.929091Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-04T17:18:48.692226Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.692318Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.692344Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.693010Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.693499Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.694092Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.697881Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-04T17:18:48.699088Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:18:48.699997Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:18:48.759261Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.759324Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.759889Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.760803Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.763050Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:18:48.765808Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-04T17:18:48.770746Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.771297Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.773918Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-04T17:18:48.835386Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.835994Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.838565Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:18:48.901433Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.902088Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:48.904919Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-04T17:18:49.368993Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.369668Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.372990Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-04T17:18:49.434204Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.434835Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.437817Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:18:49.749734Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.750494Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.753453Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:18:49.758485Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.758997Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.761816Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-04T17:18:49.791000Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.791066Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.791092Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.791646Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.792185Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.793980Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.796189Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-04T17:18:49.796459Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:18:49.798894Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-04T17:18:49.827757Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.828374Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.830794Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-04T17:18:49.844386Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.844952Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.847358Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:18:49.877995Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.878863Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.879119Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.880195Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:49.883149Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:18:49.884088Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-04T17:18:50.396848Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.397491Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.400973Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-04T17:18:50.413512Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.414065Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.416854Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-04T17:18:50.446445Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.446521Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.447001Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.448925Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.450324Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:18:50.451794Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-04T17:18:50.482517Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.482606Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.483099Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.484883Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.485770Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:18:50.487724Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-04T17:18:50.518708Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.519254Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.521790Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-04T17:18:50.527034Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.527517Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.530494Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-04T17:18:50.559610Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.560067Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.562535Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-04T17:18:50.593191Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.593256Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.593667Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.594235Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.597010Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-04T17:18:50.598235Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-04T17:18:50.658237Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.658736Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.661459Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-04T17:18:50.691071Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.691476Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.691897Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.692243Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.695639Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:18:50.696785Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-04T17:18:50.757058Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.757139Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.757556Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.757799Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.761276Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-04T17:18:50.762152Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-04T17:18:50.766095Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.766506Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.769038Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:18:50.798706Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.799134Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.801852Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-04T17:18:50.802758Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.803188Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.805782Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:18:50.836122Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.836489Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.838873Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-04T17:18:50.868245Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.982359Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.982764Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:50.985236Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:18:51.047091Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.211285Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.211683Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.214380Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-04T17:18:51.275820Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.339721Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.340216Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.342877Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-04T17:18:51.405492Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.669976Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.670510Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.673242Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-04T17:18:51.734817Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.899008Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.899401Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:18:51.901817Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-04T17:18:51.931596Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.496750Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.497352Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.500509Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-04T17:18:52.513375Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.513825Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.516122Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-04T17:18:52.529853Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.561667Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.561890Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.562047Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.562582Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.564578Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.565156Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:18:52.567501Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:18:52.568165Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:18:52.599104Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.599159Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.599181Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.599384Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.599663Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.602046Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:18:52.603111Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:18:52.632870Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.632944Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.633139Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:18:52.635532Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:18:52.665272Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:18:53.480808Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:18:58.355479Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:18:58.355479Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] 
[2026-06-04T17:18:58.355479Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:18:58.355539Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] 
[2026-06-04T17:18:58.355545Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:18:58.355552Z] [nf-caf636b98721137d8c16bf023074f7ba-9a438-rz5km] [600_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec