File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/9f283ecf42d638dbd1251ab4bcfa72/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hkjv4dnp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:22,002 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:22,786 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:22,953 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:23,807 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:23,979 - cnv_pipe.batch.run_model - INFO - Processing cluster 853 with 192 probes
2026-06-04 17:23:24,342 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process started for cluster 853 with 192 probes
2026-06-04 17:24:19,776 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process finished cluster 853. Wrote cluster_853_samples.csv and cluster_853_params.csv
2026-06-04 17:24:19,777 - cnv_pipe.batch.run_model - INFO - Cluster 853 finished in 55.80 seconds. Status: SUCCESS