File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/9baf576d863948c91297d265e8bc71/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-iddbn0ah because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:22:43,679 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:22:44,624 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:22:44,819 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:22:45,817 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:22:45,966 - cnv_pipe.batch.run_model - INFO - Processing cluster 633 with 198 probes
2026-06-04 17:22:46,420 - cnv_pipe.batch.run_model.cluster633 - INFO - Child process started for cluster 633 with 198 probes
2026-06-04 17:23:52,382 - cnv_pipe.batch.run_model.cluster633 - INFO - Child process finished cluster 633. Wrote cluster_633_samples.csv and cluster_633_params.csv
2026-06-04 17:23:52,383 - cnv_pipe.batch.run_model - INFO - Cluster 633 finished in 66.42 seconds. Status: SUCCESS