File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/85ed850237d75268b93677aa572457/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_wwheaev because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:01,788 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:02,644 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:02,818 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:03,889 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:03,959 - cnv_pipe.batch.run_model - INFO - Processing cluster 740 with 130 probes
2026-06-04 17:23:04,356 - cnv_pipe.batch.run_model.cluster740 - INFO - Child process started for cluster 740 with 130 probes
2026-06-04 17:23:45,050 - cnv_pipe.batch.run_model.cluster740 - INFO - Child process finished cluster 740. Wrote cluster_740_samples.csv and cluster_740_params.csv
2026-06-04 17:23:45,051 - cnv_pipe.batch.run_model - INFO - Cluster 740 finished in 41.09 seconds. Status: SUCCESS