File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/8f19f04e6383c1c32a564d04ae97d9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1uxwxp6x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:23:16,193 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:23:16,963 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:23:17,127 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:23:17,955 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:23:18,089 - cnv_pipe.batch.run_model - INFO - Processing cluster 822 with 179 probes
2026-06-04 17:23:18,447 - cnv_pipe.batch.run_model.cluster822 - INFO - Child process started for cluster 822 with 179 probes
2026-06-04 17:24:08,316 - cnv_pipe.batch.run_model.cluster822 - INFO - Child process finished cluster 822. Wrote cluster_822_samples.csv and cluster_822_params.csv
2026-06-04 17:24:08,317 - cnv_pipe.batch.run_model - INFO - Cluster 822 finished in 50.23 seconds. Status: SUCCESS