File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/3850d56c86b4c94a123b2c9783eb18/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3tgfzd93 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:49,306 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:50,158 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:50,336 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:51,587 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:51,662 - cnv_pipe.batch.run_model - INFO - Processing cluster 1208 with 178 probes
2026-06-04 19:48:52,368 - cnv_pipe.batch.run_model.cluster1208 - INFO - Child process started for cluster 1208 with 178 probes
2026-06-04 19:49:57,427 - cnv_pipe.batch.run_model.cluster1208 - INFO - Child process finished cluster 1208. Wrote cluster_1208_samples.csv and cluster_1208_params.csv
2026-06-04 19:49:57,429 - cnv_pipe.batch.run_model - INFO - Cluster 1208 finished in 65.77 seconds. Status: SUCCESS