[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXzC31dl/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXzC31dl/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXzC31dl/chr6_138229684-138229952.bed.gz.tbi
[2026-06-04T19:43:16.498330Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T19:43:16.499035Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T19:43:16.499049Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T19:43:16.499054Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T19:43:16.499059Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXzC31dl'
[2026-06-04T19:43:16.499063Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T19:43:16.499069Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T19:43:16.499072Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T19:43:16.499076Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T19:43:16.499080Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T19:43:16.499084Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T19:43:16.499088Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T19:43:16.499092Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T19:43:16.499096Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T19:43:16.499709Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T19:43:16.499831Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T19:43:16.505832Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T19:43:16.506644Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T19:43:16.506857Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T19:43:16.507160Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T19:43:16.507512Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508134Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508236Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508308Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508427Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508494Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508647Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.508911Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.509289Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.509429Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.509619Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.510143Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.510484Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.512199Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.513024Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.513419Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T19:43:16.513524Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.513705Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514022Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514088Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514279Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514346Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514458Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514524Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514635Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514696Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514811Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.514874Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515112Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515424Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515577Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515672Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515788Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515851Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.515959Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.516028Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.516137Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.516201Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.516349Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.516409Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.516764Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517109Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517247Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517314Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517422Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517510Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517627Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517691Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517868Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.517934Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518044Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518198Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518635Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518698Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518808Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518869Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.518980Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519045Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519154Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519217Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519331Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519392Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519501Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519564Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.519854Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520308Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520419Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520481Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520589Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520654Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520763Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520828Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520949Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.521020Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.522556Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523118Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523248Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523319Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523437Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523504Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523612Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523675Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523785Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523846Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.523954Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.524021Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.524194Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.524879Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525014Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525086Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525202Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525270Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525379Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525443Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525566Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525628Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525748Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525811Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525931Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526079Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527097Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527199Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527360Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527431Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527549Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527621Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527733Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527877Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528177Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528865Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531395Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532186Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532618Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.533417Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.546416Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.547191Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.547366Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.547549Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.548690Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.548754Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.548984Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.549448Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.549699Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.550133Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.550309Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.551147Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.552116Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.552426Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.552996Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.553427Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.554249Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.554723Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T19:43:16.555224Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.559825Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T19:43:16.566127Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T19:43:16.568629Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T19:43:16.569352Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T19:43:16.572353Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T19:43:16.574827Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T19:43:16.576380Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T19:43:16.690142Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.690225Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.691361Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.692036Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.695324Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T19:43:16.695879Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T19:43:16.757481Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.758709Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.761627Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T19:43:17.073662Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.074967Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.078031Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T19:43:17.413518Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T19:43:17.440270Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.441612Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.444762Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T19:43:17.706527Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.707664Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.711184Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T19:43:17.822374Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.823646Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.826498Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T19:43:17.839776Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.841018Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.844245Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T19:43:17.905310Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.906482Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.909765Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T19:43:18.021391Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.022616Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.025884Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T19:43:18.039005Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.040202Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.043315Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T19:43:18.104885Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.106153Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.109126Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T19:43:18.170322Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.171847Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.174844Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T19:43:18.204450Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.205718Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.208695Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T19:43:18.270185Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.271423Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.274859Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T19:43:18.335724Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.336967Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.339777Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T19:43:18.402668Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.403818Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.407100Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T19:43:18.818771Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.819855Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.822704Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T19:43:18.884168Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.885773Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.888778Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T19:43:18.918032Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.919168Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.922304Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T19:43:18.983467Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.983588Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.984909Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.985640Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.988808Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T19:43:18.989268Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T19:43:19.017922Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.018137Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.019908Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.020315Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.022764Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.023271Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T19:43:19.025181Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.027778Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T19:43:19.028861Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T19:43:19.058483Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.060185Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.063579Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T19:43:19.124522Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.124651Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.126283Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.127095Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.127452Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.129987Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T19:43:19.132206Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.132433Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T19:43:19.135197Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T19:43:19.164222Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.165210Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.168118Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T19:43:19.229449Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.231063Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.233981Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T19:43:19.646064Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.647118Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.649973Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T19:43:19.711468Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.712519Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.715610Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T19:43:19.877158Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.878171Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.881484Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T19:43:20.042528Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.043599Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.046576Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T19:43:20.107966Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.109021Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.112501Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T19:43:20.274098Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.275151Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.278054Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T19:43:20.339588Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.340561Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.344013Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T19:43:20.373400Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.374410Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.377084Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T19:43:20.438520Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.438618Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.439602Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.440339Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.446201Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T19:43:20.446712Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T19:43:20.506938Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.507039Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.507940Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.508367Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.511368Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T19:43:20.512325Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T19:43:20.524630Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.525583Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.528031Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T19:43:20.558715Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.558784Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.559658Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.559989Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.562796Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T19:43:20.564187Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T19:43:20.624344Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.624438Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.625395Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.625688Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.628619Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T19:43:20.629753Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T19:43:20.690021Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.690120Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.691007Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.691436Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.694958Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T19:43:20.695525Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T19:43:20.725061Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.726211Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.728978Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T19:43:20.742147Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.743347Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.746000Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T19:43:20.751153Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.752229Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.755015Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T19:43:20.784153Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.785049Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.787876Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T19:43:20.817039Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.818057Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.820583Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T19:43:20.850064Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.851374Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.854361Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T19:43:20.916055Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.916173Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.917097Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.917481Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.921621Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T19:43:20.921825Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T19:43:20.982095Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.983039Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.986632Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T19:43:21.198134Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.199128Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.202352Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T19:43:21.263486Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.264454Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.267544Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T19:43:21.429128Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.430036Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.433169Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T19:43:21.494290Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.495220Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.498238Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:21.609649Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.610476Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.613880Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:21.675198Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.676070Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.678942Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T19:43:21.740378Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.741344Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.744390Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T19:43:21.773842Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.774746Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.777410Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T19:43:21.808115Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.808977Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.812055Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T19:43:21.923285Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.924259Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.927440Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T19:43:21.956480Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.957309Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.959991Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T19:43:21.973140Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.973910Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.976734Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T19:43:21.981708Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.982737Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.986022Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T19:43:21.990824Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.991812Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.994348Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T19:43:22.023750Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.024451Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.027136Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T19:43:22.056488Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.056589Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.057337Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.057799Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.060928Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T19:43:22.061983Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T19:43:22.090046Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.090152Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.090975Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.091303Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.094201Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T19:43:22.095080Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T19:43:22.123600Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.123672Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.124354Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.124604Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.127760Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T19:43:22.128878Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T19:43:22.189168Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.189919Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.192862Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T19:43:22.254000Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.254722Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.257740Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T19:43:22.519603Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.520305Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.523185Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T19:43:22.552277Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.552977Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.555490Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T19:43:22.584780Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.585440Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.587969Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T19:43:22.617254Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.617888Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.620520Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T19:43:22.649981Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.650687Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.653476Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:22.764885Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.765611Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.768190Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:22.829751Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.829831Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.830603Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.830874Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.834124Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T19:43:22.884344Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T19:43:22.895410Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.895491Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.896443Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.896817Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.899552Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T19:43:22.900101Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T19:43:22.928830Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.929504Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.932064Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T19:43:22.932979Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.933447Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.935655Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T19:43:22.965319Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.965895Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.968383Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T19:43:22.981733Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.982391Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.984994Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T19:43:22.998153Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.998732Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.001160Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T19:43:23.030736Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.030827Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.031513Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.034295Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T19:43:23.196010Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.196093Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.196759Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.197160Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.199987Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T19:43:23.201008Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T19:43:23.229276Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.229387Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.245193Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.245728Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.248080Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T19:43:23.277595Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.341942Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.342489Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.344978Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T19:43:23.374325Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.639034Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.639633Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.642079Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T19:43:23.671465Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.986247Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.986867Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.989622Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T19:43:24.019002Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.433797Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.434514Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.437081Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T19:43:24.466476Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.466783Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.466913Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.467210Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.467680Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.472121Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T19:43:24.473170Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T19:43:24.474031Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T19:43:24.500002Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.500068Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.500090Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.500297Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.500522Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.503349Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T19:43:24.503618Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T19:43:24.532416Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.532520Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.532709Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.535002Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T19:43:24.564682Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.133945Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T19:43:35.387647Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T19:43:35.387647Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] 
[2026-06-04T19:43:35.387647Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T19:43:35.387729Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] 
[2026-06-04T19:43:35.387738Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T19:43:35.387747Z] [nf-5fa16f763405c7fe916b5709eb3ab66f-3cbe9-wdlhr] [581_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec