File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/84df84256a4ff833c65bb2c557e65c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u0y199ab because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:57,397 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:58,177 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:58,343 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:59,256 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:59,427 - cnv_pipe.batch.run_model - INFO - Processing cluster 935 with 200 probes
2026-06-04 19:47:59,806 - cnv_pipe.batch.run_model.cluster935 - INFO - Child process started for cluster 935 with 200 probes
2026-06-04 19:48:56,929 - cnv_pipe.batch.run_model.cluster935 - INFO - Child process finished cluster 935. Wrote cluster_935_samples.csv and cluster_935_params.csv
2026-06-04 19:48:56,930 - cnv_pipe.batch.run_model - INFO - Cluster 935 finished in 57.50 seconds. Status: SUCCESS