File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/afbfeccccea3117619faac13ccb0d5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x0xrn8ad because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:38,400 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:39,330 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:39,515 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:41,070 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:41,171 - cnv_pipe.batch.run_model - INFO - Processing cluster 1144 with 194 probes
2026-06-04 19:48:41,681 - cnv_pipe.batch.run_model.cluster1144 - INFO - Child process started for cluster 1144 with 194 probes
2026-06-04 19:49:57,513 - cnv_pipe.batch.run_model.cluster1144 - INFO - Child process finished cluster 1144. Wrote cluster_1144_samples.csv and cluster_1144_params.csv
2026-06-04 19:49:57,515 - cnv_pipe.batch.run_model - INFO - Cluster 1144 finished in 76.34 seconds. Status: SUCCESS