[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX4OXS8v/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX4OXS8v/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX4OXS8v/chr6_138229684-138229952.bed.gz.tbi
[2026-06-04T19:43:17.541084Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T19:43:17.541824Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T19:43:17.541835Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T19:43:17.541840Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T19:43:17.541844Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX4OXS8v'
[2026-06-04T19:43:17.541848Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T19:43:17.541852Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T19:43:17.541856Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T19:43:17.541859Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T19:43:17.541863Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T19:43:17.541867Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T19:43:17.541870Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T19:43:17.541874Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T19:43:17.541878Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T19:43:17.542468Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T19:43:17.542621Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T19:43:17.548642Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T19:43:17.549217Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T19:43:17.549445Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T19:43:17.549775Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.550060Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T19:43:17.550894Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.551119Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.551437Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.551645Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.551837Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.552238Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.552585Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.552819Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.554402Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.554893Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T19:43:17.555000Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.555425Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.555609Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.555737Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.555804Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.555915Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.555979Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.556091Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.556152Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.556353Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.556424Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.556538Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.556667Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557017Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557079Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557192Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557257Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557366Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557433Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557545Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557613Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557736Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557799Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557911Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.557975Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.558496Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.558773Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.558899Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.558962Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559072Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559136Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559252Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559316Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559422Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559485Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559599Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.559721Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.560056Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.560235Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.560801Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561243Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561355Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561415Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561523Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561584Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561710Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561773Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561885Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.561950Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.562064Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.562124Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.562270Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.562397Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.562986Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563060Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563172Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563233Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563343Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563411Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563531Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563594Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563700Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.563763Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.565172Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.565732Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.565872Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.565943Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566057Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566127Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566237Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566300Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566411Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566477Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566623Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566698Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.566973Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.567602Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.567722Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.567787Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.567902Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.567968Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568134Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568212Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568330Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568392Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568508Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568572Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.568800Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.569463Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.569637Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.569701Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.569812Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.569876Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.569985Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.570050Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.570156Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.570217Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.570331Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.570396Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.573232Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.574063Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.574427Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.574503Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.590437Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.591275Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.591497Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.591720Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.593016Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.593203Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.593308Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.593446Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.593808Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.593926Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.594410Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.595083Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.595523Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:17.596058Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T19:43:17.596238Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.597371Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.598418Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.599944Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.601449Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.603977Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T19:43:17.608846Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T19:43:17.611524Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T19:43:17.611895Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T19:43:17.614573Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T19:43:17.617351Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T19:43:17.619840Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T19:43:17.621046Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T19:43:17.684574Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.685638Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.688282Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T19:43:17.693272Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.694658Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.695039Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.698222Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.698853Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T19:43:17.701575Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T19:43:18.614124Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.614201Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.615295Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.615532Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.618795Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T19:43:18.619702Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T19:43:18.631744Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.632744Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.635318Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T19:43:18.697018Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.698449Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.701270Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T19:43:18.762739Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.763927Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.766491Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T19:43:18.878164Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.878247Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.879398Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.879671Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.883184Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T19:43:18.883944Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T19:43:18.944448Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.945607Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.948407Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T19:43:19.009661Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.009733Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.009769Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.010876Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.011165Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.011645Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.015242Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T19:43:19.017061Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T19:43:19.017355Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T19:43:19.076980Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.077062Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.078165Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.078430Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.081139Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T19:43:19.082147Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T19:43:19.110665Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.111840Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.114657Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T19:43:19.175987Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.177150Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.179846Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T19:43:19.442123Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.443279Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.446006Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T19:43:19.507414Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.508677Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.511370Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T19:43:19.572944Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.574111Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.576657Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T19:43:19.738469Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.740016Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.742587Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T19:43:19.804430Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.805586Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.808736Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T19:43:19.869687Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.870791Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.873268Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T19:43:19.902883Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.903932Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.906349Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T19:43:19.967845Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.968977Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.971328Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T19:43:20.033012Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.034109Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.036576Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T19:43:20.098298Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.099385Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.102340Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T19:43:20.131495Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.132583Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.135346Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T19:43:20.247099Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.248216Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.250963Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T19:43:20.264229Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.265271Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.267536Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T19:43:20.329459Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.329564Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.330603Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.330931Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.333443Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T19:43:20.336089Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T19:43:20.395890Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.396895Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.399431Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T19:43:20.428859Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.429922Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.432305Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T19:43:20.445718Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.446660Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.449044Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T19:43:20.462514Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.463562Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.466245Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T19:43:20.479568Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.480537Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.483509Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T19:43:20.496517Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.497811Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.500504Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T19:43:20.529997Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.531278Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.534317Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T19:43:20.563133Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.564174Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.566464Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T19:43:20.595908Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.596978Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.599583Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T19:43:20.660881Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.661959Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.664871Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T19:43:20.693909Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.694911Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.697686Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T19:43:20.759009Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.760043Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.762728Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T19:43:20.791823Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.792851Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.795219Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T19:43:20.824589Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.824664Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.825597Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.825963Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.828678Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T19:43:20.829795Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T19:43:20.858242Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.859223Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.861973Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T19:43:20.973221Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.974226Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.976737Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T19:43:21.038128Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.039125Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.041891Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T19:43:21.303580Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.304690Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.307700Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T19:43:21.368745Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.368821Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.369818Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.370233Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.373894Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T19:43:21.386805Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.387753Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.390473Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T19:43:21.451822Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.452851Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.456080Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:21.567293Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.568353Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.571287Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T19:43:21.632450Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.633390Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.636294Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T19:43:21.697485Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.697600Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.698868Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.699235Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.702145Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T19:43:21.745804Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T19:43:21.763489Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.763593Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.763628Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.764758Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.765121Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.765421Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.768666Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T19:43:21.769780Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T19:43:21.770553Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T19:43:21.830110Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.830218Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.830264Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.831427Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.831816Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.832316Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.835650Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T19:43:21.838182Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T19:43:21.888679Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T19:43:21.897544Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.897619Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.898814Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.899153Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.902368Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T19:43:21.903450Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T19:43:21.931615Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.932406Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.934928Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T19:43:21.964410Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.965398Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.968298Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T19:43:21.981155Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.982105Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.984707Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T19:43:22.397082Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.398162Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.400882Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T19:43:22.562391Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.563295Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.566120Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T19:43:22.595281Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.596184Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.598957Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T19:43:22.660100Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.660985Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.663657Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T19:43:22.692864Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.693734Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.696232Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T19:43:22.925741Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T19:43:22.958094Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.959012Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.962197Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T19:43:22.974959Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.975798Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.978274Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T19:43:23.007646Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.008482Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.010848Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T19:43:23.272699Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.273581Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.276749Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T19:43:23.305517Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.306317Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.309279Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T19:43:23.470444Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.470525Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.471345Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.471633Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.474726Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T19:43:23.475608Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T19:43:23.503907Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.504688Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.507152Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T19:43:23.536469Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.537235Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.539883Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T19:43:23.651255Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.652060Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.654758Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T19:43:23.684025Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.684784Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.687432Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T19:43:23.716569Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.717332Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.719969Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T19:43:23.749052Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.750041Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.750557Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.750587Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.751362Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.751778Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.754812Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T19:43:23.756009Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T19:43:23.757077Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T19:43:23.785133Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.785301Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.786219Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.786461Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.786731Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.787909Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.790652Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T19:43:23.792208Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T19:43:23.793465Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:23.853508Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.853592Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.853626Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.854315Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.854771Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.855037Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.858985Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T19:43:23.860298Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T19:43:23.861388Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:23.887567Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.888287Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.891031Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T19:43:23.891956Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.892560Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.894837Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T19:43:23.924549Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.924639Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.956942Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.957740Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.960333Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T19:43:23.989758Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.554937Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.555668Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.558415Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T19:43:24.587621Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.751840Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.752401Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.754821Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T19:43:24.784187Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.848233Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.848799Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.851326Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T19:43:24.880602Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.195074Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.195670Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.198789Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T19:43:25.227612Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.391824Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.392365Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.394602Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T19:43:25.424264Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.424763Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.424970Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.425258Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.425564Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.430433Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T19:43:25.431858Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T19:43:25.432780Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T19:43:25.457654Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.457890Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.458218Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.458618Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.459108Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.461461Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T19:43:25.488259Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T19:43:25.491707Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.495163Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.495417Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.497901Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T19:43:25.559476Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.178214Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T19:43:36.430161Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T19:43:36.430161Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] 
[2026-06-04T19:43:36.430161Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T19:43:36.430226Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] 
[2026-06-04T19:43:36.430234Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T19:43:36.430242Z] [nf-e50923abf2d97c21b71c0927cc09e63d-4c129-rsglp] [640_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec