File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/8bc5b20bf6f445026a2145cb5a2753/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-894rdl_x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:34,858 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:35,682 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:35,855 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:36,794 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:36,960 - cnv_pipe.batch.run_model - INFO - Processing cluster 1132 with 192 probes
2026-06-04 19:48:37,351 - cnv_pipe.batch.run_model.cluster1132 - INFO - Child process started for cluster 1132 with 192 probes
2026-06-04 19:49:38,247 - cnv_pipe.batch.run_model.cluster1132 - INFO - Child process finished cluster 1132. Wrote cluster_1132_samples.csv and cluster_1132_params.csv
2026-06-04 19:49:38,248 - cnv_pipe.batch.run_model - INFO - Cluster 1132 finished in 61.29 seconds. Status: SUCCESS