File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/c0c6d864f9fc8b8c05c330fd1ab51b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-asyvbmnn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:26,249 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:27,113 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:27,295 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:28,265 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:28,486 - cnv_pipe.batch.run_model - INFO - Processing cluster 1088 with 191 probes
2026-06-04 19:48:28,873 - cnv_pipe.batch.run_model.cluster1088 - INFO - Child process started for cluster 1088 with 191 probes
2026-06-04 19:49:26,077 - cnv_pipe.batch.run_model.cluster1088 - INFO - Child process finished cluster 1088. Wrote cluster_1088_samples.csv and cluster_1088_params.csv
2026-06-04 19:49:26,079 - cnv_pipe.batch.run_model - INFO - Cluster 1088 finished in 57.59 seconds. Status: SUCCESS