File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/32a6d55bbddefb607bc3fd4e563151/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3_o0gf0x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:20,579 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:21,987 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:22,283 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:24,050 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:24,309 - cnv_pipe.batch.run_model - INFO - Processing cluster 701 with 200 probes
2026-06-04 19:47:24,962 - cnv_pipe.batch.run_model.cluster701 - INFO - Child process started for cluster 701 with 200 probes
2026-06-04 19:49:05,696 - cnv_pipe.batch.run_model.cluster701 - INFO - Child process finished cluster 701. Wrote cluster_701_samples.csv and cluster_701_params.csv
2026-06-04 19:49:05,698 - cnv_pipe.batch.run_model - INFO - Cluster 701 finished in 101.39 seconds. Status: SUCCESS