[2026-06-04T19:43:16.511205Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T19:43:16.512376Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T19:43:16.512388Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T19:43:16.512394Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T19:43:16.512398Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXG0NZvl'
[2026-06-04T19:43:16.512402Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T19:43:16.512407Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T19:43:16.512410Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T19:43:16.512414Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T19:43:16.512418Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T19:43:16.512422Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T19:43:16.512425Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T19:43:16.512429Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T19:43:16.512433Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T19:43:16.513026Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T19:43:16.513124Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T19:43:16.518727Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T19:43:16.519470Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T19:43:16.519746Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T19:43:16.520035Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T19:43:16.520141Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.520903Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.521010Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.521095Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.521252Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.521523Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.521846Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.522048Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.522526Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.524219Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.524659Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.524833Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T19:43:16.525111Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525190Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525315Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525382Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525500Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525576Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.525866Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526095Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526291Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526364Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526476Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526542Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526660Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526723Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526845Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.526911Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527024Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527171Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527499Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527581Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527697Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527761Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527872Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.527936Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528048Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528117Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528257Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528320Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528438Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.528640Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529093Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529188Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529297Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529358Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529473Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529592Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529704Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529772Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529880Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.529944Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.530054Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.530114Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.530429Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.530923Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531071Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531139Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531253Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531348Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531468Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531540Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531669Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531735Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.531882Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532026Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532659Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532729Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532841Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.532907Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.533032Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.533097Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.533210Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.533274Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.534793Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535375Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535506Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535601Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535715Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535780Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535899Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.535962Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.536077Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.536140Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.536249Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.536322Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.536552Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537230Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537348Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537415Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537531Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537621Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537731Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537798Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537914Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.537975Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.538089Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.538149Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.552488Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.556380Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.557448Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.557733Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.557996Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.558277Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.559051Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.559501Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.560037Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.561544Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.562053Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.562576Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.563618Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.564437Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.567595Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.568437Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T19:43:16.572837Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T19:43:16.573745Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T19:43:16.576867Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T19:43:16.582778Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T19:43:16.584006Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T19:43:16.584348Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T19:43:16.584497Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T19:43:16.584582Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.585094Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.585821Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:16.585992Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T19:43:16.700666Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.701720Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.704655Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T19:43:16.765805Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.766859Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:16.769852Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T19:43:17.282290Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.283435Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.286550Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T19:43:17.849279Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.850271Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.852841Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T19:43:17.882387Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.883490Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.886316Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T19:43:17.915473Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.916568Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.919553Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T19:43:17.948869Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.949982Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:17.953058Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T19:43:18.064525Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.065568Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.068197Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T19:43:18.097553Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.098585Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.101470Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T19:43:18.162977Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.164080Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.166953Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T19:43:18.228340Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.229570Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.232638Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T19:43:18.245442Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.246489Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.249478Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T19:43:18.278454Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.278546Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.279605Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.279919Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.283191Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T19:43:18.284281Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T19:43:18.444808Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.445922Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.448759Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T19:43:18.510118Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.511177Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.514703Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T19:43:18.726409Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.727503Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.730531Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T19:43:18.791844Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.791927Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.792863Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.793150Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.796745Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T19:43:18.801464Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.802354Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.804874Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T19:43:18.867116Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T19:43:18.916492Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.917851Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.920843Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T19:43:19.032231Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.033550Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.036492Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T19:43:19.097845Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.099002Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.102030Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T19:43:19.162989Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.163930Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.166912Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T19:43:19.229414Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.230350Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.232946Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T19:43:19.262513Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.263494Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.266335Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T19:43:19.628319Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.629240Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.632218Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T19:43:19.693290Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.693379Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.693403Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.694286Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.694583Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.694938Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.698702Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T19:43:19.698940Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T19:43:19.699964Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T19:43:19.760498Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.760580Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.760605Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.761542Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.761887Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.762241Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.766270Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T19:43:19.767551Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T19:43:19.768198Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T19:43:19.795623Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.795705Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.796523Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.796883Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.800148Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T19:43:19.800896Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T19:43:19.829191Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.829280Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.830158Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.830419Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.833271Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T19:43:19.834255Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T19:43:19.862471Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.863440Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.863701Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.866187Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.866724Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T19:43:19.868882Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T19:43:19.930442Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.931411Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.934196Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T19:43:19.995746Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.996677Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.999874Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T19:43:20.013090Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.013957Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.016825Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T19:43:20.045927Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.046018Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.046754Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.047015Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.050330Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T19:43:20.050861Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.051770Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T19:43:20.051880Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.054624Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T19:43:20.083961Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.084042Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.084821Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.085195Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.088330Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T19:43:20.089336Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T19:43:20.117370Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.118236Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.121616Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T19:43:20.134536Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.135295Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.138432Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T19:43:20.167567Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.168387Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.171050Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T19:43:20.176034Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.176762Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.179823Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T19:43:20.208766Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.209571Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.212651Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T19:43:20.324269Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.325064Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.328407Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T19:43:20.439907Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.439999Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.440736Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.441055Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.447395Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T19:43:20.448429Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T19:43:20.478163Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.478967Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.481973Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T19:43:20.543360Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.543450Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.544163Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.544402Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.547603Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T19:43:20.548775Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T19:43:20.608860Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.609678Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.612610Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T19:43:20.641756Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.642552Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.645391Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T19:43:20.675060Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.675145Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.675883Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.676146Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.678933Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T19:43:20.679717Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T19:43:20.741165Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.741255Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.742004Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.742288Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.745594Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T19:43:20.746625Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T19:43:20.774734Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.775473Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.777994Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T19:43:20.807616Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.808379Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.811040Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:20.872467Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.873245Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.876385Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T19:43:21.088026Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088749Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.092024Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T19:43:21.403868Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.404590Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.407373Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T19:43:21.436776Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.437521Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.440330Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T19:43:21.445422Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.446056Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.448634Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T19:43:21.478006Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.478715Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.481387Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T19:43:21.510709Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.511530Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.514620Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T19:43:21.543758Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.544380Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.547424Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T19:43:21.608766Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.609483Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.612853Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T19:43:21.673897Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.674583Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.677483Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T19:43:21.706651Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.707316Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.709985Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T19:43:21.739443Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.740291Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.743182Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:21.804458Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.805213Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.807882Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:21.869282Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.870142Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.872892Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T19:43:21.934561Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.935190Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.938992Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T19:43:21.967944Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.968586Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.971579Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T19:43:21.972106Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.972556Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.974969Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T19:43:22.036703Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.036800Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.201236Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.201395Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.202087Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.202721Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.205381Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T19:43:22.206283Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T19:43:22.236109Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.236188Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.551463Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.551539Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.552082Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.552500Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.555086Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T19:43:22.556196Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T19:43:22.584598Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.584704Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.799209Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.799735Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.802432Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T19:43:22.863701Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.128295Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.128800Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.131622Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T19:43:23.160872Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.161193Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.161397Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.161858Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.162281Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.165813Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T19:43:23.167257Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T19:43:23.168079Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T19:43:23.195401Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.195485Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.195515Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.195788Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.196186Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.198935Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T19:43:23.199746Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T19:43:23.228490Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.228556Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.228818Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.231073Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T19:43:23.260824Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.131879Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T19:43:35.400920Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T19:43:35.400920Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] 
[2026-06-04T19:43:35.400920Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T19:43:35.400986Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] 
[2026-06-04T19:43:35.400993Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T19:43:35.401000Z] [nf-9d4fb9d531d673a63b168ca10574045f-4a0dd-mx49m] [612_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec