mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4qjgasmv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:46:48,110 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:46:49,188 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:46:49,428 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:46:50,736 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:46:50,965 - cnv_pipe.batch.run_model - INFO - Processing cluster 541 with 177 probes
2026-06-04 19:46:51,438 - cnv_pipe.batch.run_model.cluster541 - INFO - Child process started for cluster 541 with 177 probes
2026-06-04 19:47:56,787 - cnv_pipe.batch.run_model.cluster541 - INFO - Child process finished cluster 541. Wrote cluster_541_samples.csv and cluster_541_params.csv
2026-06-04 19:47:56,788 - cnv_pipe.batch.run_model - INFO - Cluster 541 finished in 65.82 seconds. Status: SUCCESS