cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:163000001, elapsed 0.0s, est remaining 0.8s, peak mem 102MB, user 0.1s, sys 0.8s, output queue size 7
progress 10% @chr2:73000001, elapsed 0.1s, est remaining 0.7s, peak mem 102MB, user 0.2s, sys 1.9s, output queue size 10
progress 15% @chr2:233000001, elapsed 0.1s, est remaining 0.7s, peak mem 102MB, user 0.2s, sys 3.0s, output queue size 9
progress 20% @chr3:154000001, elapsed 0.2s, est remaining 0.6s, peak mem 102MB, user 0.4s, sys 4.0s, output queue size 1
progress 25% @chr4:117000001, elapsed 0.2s, est remaining 0.6s, peak mem 102MB, user 0.5s, sys 5.2s, output queue size 1
progress 30% @chr5:86000001, elapsed 0.2s, est remaining 0.6s, peak mem 102MB, user 0.6s, sys 6.3s, output queue size 7
progress 35% @chr6:66000001, elapsed 0.3s, est remaining 0.5s, peak mem 102MB, user 0.7s, sys 7.3s, output queue size 2
progress 40% @chr7:58000001, elapsed 0.3s, est remaining 0.5s, peak mem 102MB, user 0.8s, sys 8.5s, output queue size 9
progress 45% @chr8:56000001, elapsed 0.4s, est remaining 0.4s, peak mem 102MB, user 0.8s, sys 9.8s, output queue size 8
progress 50% @chr9:69000001, elapsed 0.4s, est remaining 0.4s, peak mem 102MB, user 0.9s, sys 11.1s, output queue size 4
progress 55% @chr10:92000001, elapsed 0.4s, est remaining 0.4s, peak mem 102MB, user 1.1s, sys 12.2s, output queue size 3
progress 60% @chr11:123000001, elapsed 0.5s, est remaining 0.3s, peak mem 102MB, user 1.2s, sys 13.4s, output queue size 9
progress 65% @chr13:19000001, elapsed 0.5s, est remaining 0.3s, peak mem 102MB, user 1.2s, sys 14.7s, output queue size 5
progress 70% @chr14:62000001, elapsed 0.6s, est remaining 0.2s, peak mem 102MB, user 1.3s, sys 16.0s, output queue size 1
progress 75% @chr16:13000001, elapsed 0.6s, est remaining 0.2s, peak mem 102MB, user 1.4s, sys 17.2s, output queue size 4
progress 80% @chr17:75000001, elapsed 0.7s, est remaining 0.2s, peak mem 102MB, user 1.5s, sys 18.3s, output queue size 9
progress 85% @chr20:22000001, elapsed 0.7s, est remaining 0.1s, peak mem 102MB, user 1.5s, sys 19.7s, output queue size 1
progress 90% @chrX:37000001, elapsed 0.8s, est remaining 0.1s, peak mem 132MB, user 2.0s, sys 20.4s, output queue size 114
progress 95% @chrY:34000001, elapsed 0.8s, est remaining 0.0s, peak mem 147MB, user 2.4s, sys 21.4s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.3s, est remaining 0.0s, peak mem 169MB, user 3.7s, sys 22.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813899
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.251 user 11.947 sys 13.197 real
done: 1 calls 0.000 user 0.000 sys 0.003 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.001 sys 1.287 real
idle: 73 calls 0.009 user 0.016 sys 42.983 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 178028544 mem 3.902 user 23.589 sys 2.453 real