File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/e4c5ae6ff176f3d34dd842499e412d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ri73xhkw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:31,003 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:32,273 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:32,502 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:33,847 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:33,945 - cnv_pipe.batch.run_model - INFO - Processing cluster 1097 with 191 probes
2026-06-04 19:48:34,578 - cnv_pipe.batch.run_model.cluster1097 - INFO - Child process started for cluster 1097 with 191 probes
2026-06-04 19:49:50,449 - cnv_pipe.batch.run_model.cluster1097 - INFO - Child process finished cluster 1097. Wrote cluster_1097_samples.csv and cluster_1097_params.csv
2026-06-04 19:49:50,451 - cnv_pipe.batch.run_model - INFO - Cluster 1097 finished in 76.51 seconds. Status: SUCCESS