File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/60f93289ebd229d30451e1cb013f71/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7rjrana4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:21,744 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:22,766 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:22,977 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:24,288 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:24,552 - cnv_pipe.batch.run_model - INFO - Processing cluster 727 with 162 probes
2026-06-04 19:47:25,113 - cnv_pipe.batch.run_model.cluster727 - INFO - Child process started for cluster 727 with 162 probes
2026-06-04 19:48:28,616 - cnv_pipe.batch.run_model.cluster727 - INFO - Child process finished cluster 727. Wrote cluster_727_samples.csv and cluster_727_params.csv
2026-06-04 19:48:28,619 - cnv_pipe.batch.run_model - INFO - Cluster 727 finished in 64.07 seconds. Status: SUCCESS