File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/8da124eb224c06d9fdbfbb9c655a2a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8pg209vx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:28,324 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:29,134 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:29,316 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:30,381 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:30,448 - cnv_pipe.batch.run_model - INFO - Processing cluster 1099 with 197 probes
2026-06-04 19:48:30,822 - cnv_pipe.batch.run_model.cluster1099 - INFO - Child process started for cluster 1099 with 197 probes
2026-06-04 19:49:30,344 - cnv_pipe.batch.run_model.cluster1099 - INFO - Child process finished cluster 1099. Wrote cluster_1099_samples.csv and cluster_1099_params.csv
2026-06-04 19:49:30,346 - cnv_pipe.batch.run_model - INFO - Cluster 1099 finished in 59.90 seconds. Status: SUCCESS