.command.err - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr20_14085521-14085828.bed)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/e4b7e16fb11f1aefa6330875eb31a5/.command.err
Size: 87.8 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr20_14085521-14085828.bed)
Attempt
Content

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUX7vto/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUX7vto/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUX7vto/chr20_14085521-14085828.bed.gz.tbi
[2026-06-04T19:43:20.216090Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T19:43:20.240946Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T19:43:20.240980Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T19:43:20.240987Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T19:43:20.240994Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUX7vto'
[2026-06-04T19:43:20.240999Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T19:43:20.241006Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T19:43:20.241012Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T19:43:20.241018Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T19:43:20.241023Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T19:43:20.241029Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T19:43:20.241035Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T19:43:20.241054Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T19:43:20.241059Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T19:43:20.241571Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T19:43:20.241714Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T19:43:20.247609Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T19:43:20.248085Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T19:43:20.248281Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T19:43:20.248538Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T19:43:20.248848Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.249468Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.249594Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.249685Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.249836Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.249919Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.250236Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.250529Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.250668Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.251007Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.251387Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.251932Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.252076Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.252357Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.254091Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.254507Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T19:43:20.254880Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.254980Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.255131Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.255212Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.255447Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.255532Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.255707Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.255913Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256323Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256403Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256552Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256633Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256775Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256857Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.256997Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.257084Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.257274Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.257544Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258090Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258176Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258318Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258397Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258547Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258626Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258768Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258843Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.258986Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.259196Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.259728Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.259828Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.259976Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.260055Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.260310Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.260402Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.260538Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.260623Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261068Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261453Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261599Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261676Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261813Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261894Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.262040Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.262117Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.262255Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.262336Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.262819Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.263300Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.263984Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.264164Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.264307Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.264386Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.265412Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.265881Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.266023Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.266101Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.266241Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.266319Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.267786Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.267975Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.268679Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.268769Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.268908Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269008Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269188Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269273Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269418Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269496Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269678Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.269847Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.270573Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.270664Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.270801Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.270880Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271021Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271102Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271237Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271316Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271456Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271556Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.271926Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.272628Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.293435Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.294383Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.294524Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.295869Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.296015Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.296481Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.296954Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.297103Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.297695Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.298061Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.298595Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.298849Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.299494Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.300356Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.300865Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.301477Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:20.301705Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.302144Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T19:43:20.302611Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.308458Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T19:43:20.311158Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T19:43:20.312671Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T19:43:20.316762Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T19:43:20.320210Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T19:43:20.323668Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T19:43:20.327237Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T19:43:20.437865Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.437929Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.437973Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.439148Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.439447Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.439717Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.444906Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T19:43:20.446227Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T19:43:20.447301Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T19:43:20.554326Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.554409Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.555700Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.555990Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.559789Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T19:43:20.561024Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T19:43:21.171827Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.173178Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.176123Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T19:43:21.237146Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.238479Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.241666Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T19:43:21.302407Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.303522Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.306381Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T19:43:21.567885Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.569058Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.572412Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T19:43:21.585001Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.586109Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.589169Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T19:43:21.650154Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.651272Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.654073Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T19:43:21.683204Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.684280Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.686726Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T19:43:21.948541Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.949997Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.952977Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T19:43:22.014013Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.015387Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.018189Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T19:43:22.129410Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.130585Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.133460Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T19:43:22.244650Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.245773Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.248585Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T19:43:22.309599Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.310632Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.313582Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T19:43:22.374668Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.375707Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.378585Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T19:43:22.489714Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.490763Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.493510Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T19:43:22.522448Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.523447Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.526057Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T19:43:22.633486Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T19:43:22.637280Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.637346Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.638364Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.638611Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.641839Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T19:43:22.672814Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T19:43:22.702708Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.702764Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.702789Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.703760Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.703980Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.704291Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.709263Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T19:43:22.710774Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T19:43:22.711780Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T19:43:23.018981Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.020301Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.023125Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T19:43:23.052342Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.053419Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.056406Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T19:43:23.117417Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.117518Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.118602Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.118913Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.122605Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T19:43:23.123876Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T19:43:23.183766Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.184915Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.187307Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T19:43:23.216853Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.218056Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.220972Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T19:43:23.282099Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.283292Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.286726Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T19:43:23.648155Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.649500Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.652712Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T19:43:23.713638Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.714790Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.717990Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T19:43:23.829267Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.830420Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.833512Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T19:43:23.862514Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.863565Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.866660Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T19:43:24.028094Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.029270Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.032417Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T19:43:24.093407Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.094522Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.097507Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T19:43:24.208681Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.209784Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.212703Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T19:43:24.273888Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.275001Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.278057Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T19:43:24.389291Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.390441Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.393527Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T19:43:24.454520Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.455576Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.458300Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T19:43:24.487735Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.487821Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.487861Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.488923Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.489329Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.489692Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.493871Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T19:43:24.494153Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T19:43:24.527379Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T19:43:24.554605Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.554692Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.554737Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.556202Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.556746Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.557170Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.560016Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T19:43:24.563084Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T19:43:24.564275Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T19:43:24.573580Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.574599Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.577596Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T19:43:24.638482Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.639439Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.642437Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T19:43:24.753572Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.754446Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.757606Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T19:43:24.868896Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.869849Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.872753Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T19:43:24.933742Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.934635Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.937439Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T19:43:24.998554Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.999516Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.002516Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T19:43:25.213768Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.214631Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.217991Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T19:43:25.278654Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.279556Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.282697Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T19:43:25.594348Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.595334Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.598207Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T19:43:25.709676Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.710548Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.713910Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T19:43:25.824991Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.825914Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.828998Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T19:43:25.889912Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.890873Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.894152Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T19:43:26.656776Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.657779Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.660883Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T19:43:26.722070Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.722166Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.722960Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.723282Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.726367Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T19:43:26.727724Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T19:43:26.787358Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.788157Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.791207Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T19:43:27.253166Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.254137Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.257344Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T19:43:27.318355Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.319324Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.322455Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T19:43:27.433586Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.434452Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.437676Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T19:43:27.648928Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.649007Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.649898Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.650182Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.653339Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T19:43:27.654129Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T19:43:27.714411Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.714471Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.715114Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.715447Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.718275Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T19:43:27.719269Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T19:43:27.747450Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.748306Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.748531Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.750464Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.752029Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T19:43:27.752985Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T19:43:27.782578Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.782665Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.783323Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.783566Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.786435Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T19:43:27.787618Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T19:43:27.815635Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.815708Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.816281Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.816499Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.819468Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T19:43:27.820458Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T19:43:27.848414Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.849023Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.851409Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T19:43:27.880704Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.881287Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.884081Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T19:43:27.945066Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.945653Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.948161Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T19:43:28.009399Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.009463Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.010030Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.010278Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.013468Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T19:43:28.014382Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T19:43:28.042175Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.045996Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.210339Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.211028Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.213719Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T19:43:28.243046Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.657973Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.658662Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.662071Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T19:43:28.723171Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.937806Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.938611Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.941940Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T19:43:29.003206Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:29.003832Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:29.006534Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T19:43:29.117831Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:29.482625Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:29.483261Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T19:43:29.486137Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T19:43:29.547423Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:31.063951Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:31.064621Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:31.067580Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T19:43:31.128642Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.749572Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.750208Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.753008Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T19:43:39.814246Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.814663Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.814849Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.815228Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.815713Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.823253Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T19:43:39.824980Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T19:43:39.826473Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T19:43:39.880138Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.880190Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.880213Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.880420Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.880764Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.883727Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T19:43:39.884730Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T19:43:39.944937Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.945070Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.945358Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:39.948712Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T19:43:40.009582Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:53.429489Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T19:44:08.360086Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T19:44:08.360086Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] 
[2026-06-04T19:44:08.360086Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T19:44:08.360168Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] 
[2026-06-04T19:44:08.360175Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T19:44:08.360184Z] [nf-5ce4b7e16fb11f1aefa6330875eb31a5-30945-57jqj] [784_1] [WorkflowRunner] Elapsed time for full workflow: 48 sec