cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:164000001, elapsed 0.0s, est remaining 0.7s, peak mem 112MB, user 0.1s, sys 0.6s, output queue size 20
progress 10% @chr2:36000001, elapsed 0.1s, est remaining 0.6s, peak mem 112MB, user 0.2s, sys 1.5s, output queue size 37
progress 15% @chr2:239000001, elapsed 0.1s, est remaining 0.6s, peak mem 112MB, user 0.3s, sys 2.4s, output queue size 23
progress 20% @chr3:138000001, elapsed 0.1s, est remaining 0.5s, peak mem 112MB, user 0.4s, sys 3.2s, output queue size 15
progress 25% @chr4:116000001, elapsed 0.2s, est remaining 0.5s, peak mem 112MB, user 0.4s, sys 4.1s, output queue size 26
progress 30% @chr5:89000001, elapsed 0.2s, est remaining 0.4s, peak mem 112MB, user 0.5s, sys 4.9s, output queue size 4
progress 35% @chr6:71000001, elapsed 0.2s, est remaining 0.4s, peak mem 112MB, user 0.7s, sys 5.6s, output queue size 12
progress 40% @chr7:61000001, elapsed 0.3s, est remaining 0.4s, peak mem 112MB, user 0.8s, sys 6.4s, output queue size 29
progress 45% @chr8:58000001, elapsed 0.3s, est remaining 0.3s, peak mem 112MB, user 0.9s, sys 7.3s, output queue size 4
progress 50% @chr9:75000001, elapsed 0.3s, est remaining 0.3s, peak mem 112MB, user 1.0s, sys 8.1s, output queue size 18
progress 55% @chr10:99000001, elapsed 0.3s, est remaining 0.3s, peak mem 112MB, user 1.1s, sys 8.9s, output queue size 15
progress 60% @chr11:120000001, elapsed 0.4s, est remaining 0.2s, peak mem 112MB, user 1.1s, sys 9.7s, output queue size 3
progress 65% @chr13:16000001, elapsed 0.4s, est remaining 0.2s, peak mem 112MB, user 1.2s, sys 10.5s, output queue size 15
progress 70% @chr14:58000001, elapsed 0.4s, est remaining 0.2s, peak mem 112MB, user 1.3s, sys 11.3s, output queue size 9
progress 75% @chr15:101000001, elapsed 0.5s, est remaining 0.2s, peak mem 112MB, user 1.4s, sys 12.2s, output queue size 16
progress 80% @chr18:2000001, elapsed 0.5s, est remaining 0.1s, peak mem 112MB, user 1.5s, sys 13.0s, output queue size 7
progress 85% @chr20:26000001, elapsed 0.5s, est remaining 0.1s, peak mem 112MB, user 1.6s, sys 13.8s, output queue size 17
progress 90% @chrX:39000001, elapsed 0.6s, est remaining 0.1s, peak mem 139MB, user 2.0s, sys 14.2s, output queue size 114
progress 95% @chr21:38000001, elapsed 0.6s, est remaining 0.0s, peak mem 156MB, user 2.5s, sys 14.9s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 175MB, user 3.8s, sys 15.8s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395359
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.231 user 7.735 sys 9.648 real
done: 1 calls 0.003 user 0.000 sys 0.009 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.003 sys 0.920 real
idle: 73 calls 0.008 user 0.013 sys 38.812 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 184311808 mem 4.219 user 16.708 sys 2.424 real