mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nkap2i5o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:46:59,830 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:00,687 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:00,866 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:02,197 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:02,476 - cnv_pipe.batch.run_model - INFO - Processing cluster 612 with 40 probes
2026-06-04 19:47:02,994 - cnv_pipe.batch.run_model.cluster612 - INFO - Child process started for cluster 612 with 40 probes
2026-06-04 19:47:24,384 - cnv_pipe.batch.run_model.cluster612 - INFO - Child process finished cluster 612. Wrote cluster_612_samples.csv and cluster_612_params.csv
2026-06-04 19:47:24,385 - cnv_pipe.batch.run_model - INFO - Cluster 612 finished in 21.91 seconds. Status: SUCCESS