File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/6b262e190001b11e7ec594d671be9e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8hpeahub because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:17,740 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:18,553 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:18,719 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:19,634 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:19,787 - cnv_pipe.batch.run_model - INFO - Processing cluster 1046 with 194 probes
2026-06-04 19:48:20,183 - cnv_pipe.batch.run_model.cluster1046 - INFO - Child process started for cluster 1046 with 194 probes
2026-06-04 19:49:17,624 - cnv_pipe.batch.run_model.cluster1046 - INFO - Child process finished cluster 1046. Wrote cluster_1046_samples.csv and cluster_1046_params.csv
2026-06-04 19:49:17,625 - cnv_pipe.batch.run_model - INFO - Cluster 1046 finished in 57.84 seconds. Status: SUCCESS