cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:163000001, elapsed 0.0s, est remaining 0.5s, peak mem 102MB, user 0.1s, sys 0.3s, output queue size 3
progress 10% @chr2:73000001, elapsed 0.0s, est remaining 0.4s, peak mem 102MB, user 0.1s, sys 0.9s, output queue size 17
progress 15% @chr2:236000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.2s, sys 1.5s, output queue size 9
progress 20% @chr3:154000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.3s, sys 2.2s, output queue size 20
progress 25% @chr4:115000001, elapsed 0.1s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 2.8s, output queue size 3
progress 30% @chr5:69000001, elapsed 0.1s, est remaining 0.3s, peak mem 102MB, user 0.5s, sys 3.3s, output queue size 17
progress 35% @chr6:66000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.5s, sys 3.8s, output queue size 13
progress 40% @chr7:55000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.7s, sys 4.5s, output queue size 5
progress 45% @chr8:59000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.7s, sys 5.1s, output queue size 8
progress 50% @chr9:74000001, elapsed 0.2s, est remaining 0.2s, peak mem 102MB, user 0.8s, sys 5.7s, output queue size 10
progress 55% @chr10:93000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.8s, sys 6.4s, output queue size 2
progress 60% @chr11:124000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.8s, sys 7.1s, output queue size 12
progress 65% @chr13:14000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.9s, sys 7.7s, output queue size 6
progress 70% @chr14:62000001, elapsed 0.3s, est remaining 0.1s, peak mem 102MB, user 0.9s, sys 8.3s, output queue size 16
progress 75% @chr16:16000001, elapsed 0.3s, est remaining 0.1s, peak mem 102MB, user 0.9s, sys 8.9s, output queue size 14
progress 80% @chr17:68000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.0s, sys 9.5s, output queue size 16
progress 85% @chr20:22000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.1s, sys 10.2s, output queue size 5
progress 90% @chrX:36000001, elapsed 0.4s, est remaining 0.0s, peak mem 127MB, user 1.5s, sys 10.6s, output queue size 114
progress 95% @chrY:36000001, elapsed 0.5s, est remaining 0.0s, peak mem 141MB, user 1.8s, sys 11.1s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 165MB, user 3.1s, sys 12.0s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395359
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.193 user 6.297 sys 7.530 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 0.920 real
idle: 74 calls 0.005 user 0.013 sys 43.374 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 173027328 mem 3.336 user 12.652 sys 2.078 real