Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/27493f0d5b9dacf14e0909195d6691/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/a89d66e2efcc9c19355fc1e671cbd8/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/bccf35c41d70dc62514570166fe41e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/cc7f139de9b5111fa143515d68b36d/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/77325cd87ae9a26ca684552a5882f5/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/07e07b4157e8504cc89762cbcab85a/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/6b19bcef9e4a923d4392bdb9d342c0/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/4a927dbb5d1fd78a086ed4025bb681/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/bccf35c41d70dc62514570166fe41e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/b570569239024638d5e48c1657302e/Sig_18_Blood.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory