cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/foresight_clarity_targets_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_foresight_clarity_targets_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:163000001, elapsed 0.0s, est remaining 0.5s, peak mem 100MB, user 0.1s, sys 0.3s, output queue size 21
progress 10% @chr2:66000001, elapsed 0.0s, est remaining 0.4s, peak mem 100MB, user 0.2s, sys 1.0s, output queue size 23
progress 15% @chr2:233000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.2s, sys 1.7s, output queue size 4
progress 20% @chr3:156000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.3s, sys 2.2s, output queue size 26
progress 25% @chr4:116000001, elapsed 0.1s, est remaining 0.4s, peak mem 100MB, user 0.3s, sys 2.9s, output queue size 8
progress 30% @chr5:84000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 3.6s, output queue size 2
progress 35% @chr6:66000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 4.2s, output queue size 27
progress 40% @chr7:60000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 4.8s, output queue size 13
progress 45% @chr8:58000001, elapsed 0.2s, est remaining 0.3s, peak mem 100MB, user 0.5s, sys 5.5s, output queue size 13
progress 50% @chr9:71000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.5s, sys 6.2s, output queue size 13
progress 55% @chr10:96000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.6s, sys 6.8s, output queue size 7
progress 60% @chr11:126000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.6s, sys 7.4s, output queue size 12
progress 65% @chr13:15000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.6s, sys 8.2s, output queue size 8
progress 70% @chr14:63000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 0.7s, sys 8.8s, output queue size 10
progress 75% @chr16:14000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 0.8s, sys 9.4s, output queue size 16
progress 80% @chr18:2000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 0.8s, sys 10.2s, output queue size 23
progress 85% @chr20:23000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 0.9s, sys 10.8s, output queue size 10
progress 90% @chrX:37000001, elapsed 0.4s, est remaining 0.0s, peak mem 126MB, user 1.2s, sys 11.3s, output queue size 114
progress 95% @chrY:33000001, elapsed 0.5s, est remaining 0.0s, peak mem 141MB, user 1.6s, sys 12.0s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 164MB, user 2.6s, sys 12.8s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813899
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.124 user 6.396 sys 7.872 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 0.756 real
idle: 79 calls 0.005 user 0.017 sys 38.174 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 172306432 mem 2.813 user 13.407 sys 1.918 real