File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/a2ea5e1f98a7797bf4283ec4bc7a46/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wc9f_28i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:25,985 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:26,786 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:26,954 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:27,862 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:28,032 - cnv_pipe.batch.run_model - INFO - Processing cluster 765 with 168 probes
2026-06-04 19:47:28,415 - cnv_pipe.batch.run_model.cluster765 - INFO - Child process started for cluster 765 with 168 probes
2026-06-04 19:48:16,981 - cnv_pipe.batch.run_model.cluster765 - INFO - Child process finished cluster 765. Wrote cluster_765_samples.csv and cluster_765_params.csv
2026-06-04 19:48:16,982 - cnv_pipe.batch.run_model - INFO - Cluster 765 finished in 48.95 seconds. Status: SUCCESS