File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/4ec440718aac91eedc1a405e1d638d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0d4i3d__ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:06,161 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:07,021 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:07,204 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:08,178 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:08,273 - cnv_pipe.batch.run_model - INFO - Processing cluster 976 with 102 probes
2026-06-04 19:48:08,812 - cnv_pipe.batch.run_model.cluster976 - INFO - Child process started for cluster 976 with 102 probes
2026-06-04 19:48:46,864 - cnv_pipe.batch.run_model.cluster976 - INFO - Child process finished cluster 976. Wrote cluster_976_samples.csv and cluster_976_params.csv
2026-06-04 19:48:46,865 - cnv_pipe.batch.run_model - INFO - Cluster 976 finished in 38.59 seconds. Status: SUCCESS