[2026-06-04T19:43:21.072863Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T19:43:21.073370Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T19:43:21.073384Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T19:43:21.073390Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T19:43:21.073396Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXhLDUJ1'
[2026-06-04T19:43:21.073402Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T19:43:21.073410Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T19:43:21.073416Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T19:43:21.073422Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T19:43:21.073428Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T19:43:21.073433Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T19:43:21.073439Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T19:43:21.073444Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T19:43:21.073449Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T19:43:21.073891Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T19:43:21.074010Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T19:43:21.080059Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T19:43:21.080717Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T19:43:21.080967Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T19:43:21.081306Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T19:43:21.081589Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.082678Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.082929Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.083392Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.083517Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.083813Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.084301Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.084732Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.084900Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.086358Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.086628Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T19:43:21.086787Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087332Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087421Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087542Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087611Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087726Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087792Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087903Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.087966Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088199Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088401Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088684Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088751Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088860Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.088923Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089043Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089107Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089222Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089285Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089397Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089473Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089584Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089647Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.089918Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090272Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090382Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090447Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090557Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090620Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090748Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090815Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090928Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.090997Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.091105Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.091168Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.091293Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.091425Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.091764Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.092194Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.092691Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.092758Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.092864Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.092926Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093033Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093094Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093204Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093268Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093373Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093442Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093551Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093617Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.093943Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094377Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094494Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094561Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094671Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094747Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094862Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.094927Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.095037Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.095100Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.095206Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.095268Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.096863Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097388Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097512Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097579Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097690Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097769Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097880Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.097940Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.098196Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.098302Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.098572Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099343Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099481Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099555Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099665Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099729Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099841Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.099905Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.100013Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.100077Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.100187Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.100248Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.100371Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.100607Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.116665Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.117369Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.117700Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.117838Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.118867Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.119075Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.119463Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.119625Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.120443Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.120737Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.121033Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.121674Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.122298Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.122700Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.123336Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.123760Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:21.124404Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T19:43:21.124722Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.125803Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.130220Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T19:43:21.134049Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T19:43:21.137909Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T19:43:21.140371Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T19:43:21.143120Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T19:43:21.143892Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T19:43:21.146415Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T19:43:21.209559Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.209642Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.210563Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.211003Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.214220Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T19:43:21.215136Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.216075Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.219703Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T19:43:21.747028Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T19:43:21.781234Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.781347Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.782717Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.783100Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.786111Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T19:43:21.787138Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T19:43:21.815217Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.816636Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.819189Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T19:43:21.848537Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.850003Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.853163Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T19:43:21.914117Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.915744Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.918303Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T19:43:21.979788Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.981495Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.984603Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T19:43:22.095824Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.097105Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.099794Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T19:43:22.161019Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.162171Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.165117Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T19:43:22.476698Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.478115Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.480983Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T19:43:22.787645Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T19:43:22.792544Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.792638Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.793985Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.794569Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.797691Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T19:43:22.798590Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T19:43:22.826756Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.828124Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.831134Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T19:43:22.892397Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.893816Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.896578Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T19:43:22.957918Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.959461Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.962108Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T19:43:22.991448Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.993012Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.996230Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T19:43:23.057345Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.058860Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.061625Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T19:43:23.123043Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.124506Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.127563Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T19:43:23.539602Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.540836Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.543708Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T19:43:23.556697Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.557752Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.560419Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T19:43:23.589782Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.591210Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.593954Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T19:43:23.599070Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.600433Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.603627Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T19:43:23.914852Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.915934Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.918690Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T19:43:23.947720Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.948778Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.951937Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T19:43:24.313322Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.314444Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.317295Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T19:43:24.478736Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.479769Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.482445Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T19:43:24.543555Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.543612Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.544546Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.544917Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.547947Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T19:43:24.549067Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T19:43:24.577166Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.578170Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.580916Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T19:43:24.585907Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.586803Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.589230Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T19:43:24.650609Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.650672Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.651604Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.651898Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.654902Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T19:43:24.655857Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T19:43:24.683872Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.684806Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.686776Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.687786Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T19:43:24.688221Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.690687Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T19:43:24.720010Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.720074Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.720974Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.721252Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.724956Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T19:43:24.725511Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T19:43:24.729268Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.730114Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.732551Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T19:43:24.761827Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.762715Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.765329Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T19:43:24.794576Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.794688Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.794747Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.795706Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.796108Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.796472Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.799817Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T19:43:24.801466Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T19:43:24.802540Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T19:43:24.829767Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.831284Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.831771Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.834042Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.834362Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T19:43:24.836331Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.836692Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T19:43:24.837629Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.840065Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T19:43:24.869583Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.869685Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.869730Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.870744Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.871105Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.871535Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.873962Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T19:43:24.876897Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T19:43:24.877494Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T19:43:24.905753Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.905824Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.906638Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.906972Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.910185Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T19:43:24.910969Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T19:43:24.939350Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.940186Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.943393Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T19:43:24.972208Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.973031Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.976314Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T19:43:25.137423Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.138548Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.141143Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.142267Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.142536Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T19:43:25.144992Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T19:43:25.456962Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.458116Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.461034Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T19:43:25.490309Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.491221Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.493830Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T19:43:25.555103Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.555926Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.558936Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T19:43:25.587719Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.588523Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.591534Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T19:43:25.620421Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.621186Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.623898Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T19:43:25.652954Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.653677Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.656071Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T19:43:25.685407Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.686151Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.688555Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T19:43:25.693680Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.694368Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.696821Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:25.726099Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.726834Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.729916Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T19:43:25.758546Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.758604Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.759305Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.759623Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.762641Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:25.763795Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T19:43:25.823674Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.824408Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.827074Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:25.888279Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.888989Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.891874Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T19:43:25.920794Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.921511Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.924202Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T19:43:26.235955Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.236597Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.239268Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T19:43:26.268511Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.269132Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.271842Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T19:43:26.301191Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.301802Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.304696Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T19:43:26.333723Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.334371Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.336979Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T19:43:26.366428Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.367074Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.369844Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T19:43:26.431386Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.432027Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.434945Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T19:43:26.847092Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.847973Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.851018Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T19:43:26.962453Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.963341Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.966424Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T19:43:26.995509Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.996268Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.998973Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T19:43:27.028225Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.028322Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.029110Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.029711Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.032634Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T19:43:27.033709Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T19:43:27.061923Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.062636Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.065403Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T19:43:27.094916Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.095017Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.095789Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.096304Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.099141Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T19:43:27.100220Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T19:43:27.128434Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.128533Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.393225Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.394022Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.396685Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T19:43:27.425993Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.490339Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.491141Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.494031Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T19:43:27.523349Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.523461Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.524147Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.526801Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T19:43:27.556294Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.588476Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.589106Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.591852Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T19:43:27.621258Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.835765Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.836427Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.838885Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T19:43:27.844172Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.844770Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.847223Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T19:43:27.876740Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.876835Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.877155Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.877327Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.877691Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.878207Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.882221Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T19:43:27.884857Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T19:43:27.903818Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T19:43:27.910816Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.910895Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.910925Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.911163Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.911540Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.914309Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T19:43:27.914742Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T19:43:27.943473Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.943545Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.943755Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:27.945843Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T19:43:27.975731Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:31.698238Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T19:43:39.961598Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T19:43:39.961598Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] 
[2026-06-04T19:43:39.961598Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T19:43:39.961666Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] 
[2026-06-04T19:43:39.961672Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T19:43:39.961679Z] [nf-ec2d3e96228caca210ecde2f59952410-3f143-wvfzs] [645_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec