[2026-06-04T19:43:18.289698Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T19:43:18.290186Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T19:43:18.290197Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T19:43:18.290202Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T19:43:18.290206Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX8SLdS6'
[2026-06-04T19:43:18.290210Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T19:43:18.290215Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T19:43:18.290219Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T19:43:18.290222Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T19:43:18.290226Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T19:43:18.290229Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T19:43:18.290234Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T19:43:18.290239Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T19:43:18.290243Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T19:43:18.290734Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T19:43:18.290900Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T19:43:18.297179Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T19:43:18.297806Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T19:43:18.298078Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T19:43:18.298499Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T19:43:18.298790Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.299532Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.299625Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.299697Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.299813Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.299934Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.300465Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.300807Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.301207Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.301965Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.303363Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.304279Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.304690Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T19:43:18.304815Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305042Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305405Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305529Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305597Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305715Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305776Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.305964Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.306029Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.306141Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.306208Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.306359Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.306430Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.306769Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307050Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307163Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307227Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307341Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307422Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307535Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307598Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307707Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307777Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307886Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.307950Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.308066Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.308445Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.308859Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.308922Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309038Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309103Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309210Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309273Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309389Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309508Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309678Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.309746Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.310007Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.310134Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.310915Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.311583Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.311699Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.311767Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.311877Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.311945Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312051Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312131Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312246Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312308Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312420Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312484Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312600Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.312806Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.313808Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.313919Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.314089Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.314203Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.314363Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.314437Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.314552Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.314623Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.316465Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.317004Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.318076Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.318380Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.319379Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.319457Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.319623Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.319702Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.319865Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.319935Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.320051Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.320136Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.320326Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.320594Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.321429Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.321525Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.321686Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.321781Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.321933Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.322020Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.322158Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.322252Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.322458Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.322671Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.342258Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.342617Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.343330Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.344248Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.344432Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.344859Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.345398Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.345815Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.346186Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.346878Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.347066Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.348094Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.348603Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.349171Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.350249Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.350853Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.352574Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.353285Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T19:43:18.353876Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T19:43:18.357706Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T19:43:18.361129Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T19:43:18.365144Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T19:43:18.369955Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T19:43:18.373541Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T19:43:18.376164Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T19:43:18.379152Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T19:43:18.440515Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.441681Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.445636Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T19:43:18.474627Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.475843Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.479176Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T19:43:18.540300Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.541628Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.545602Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T19:43:18.607005Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.608843Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:18.611891Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T19:43:19.455410Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T19:43:19.475363Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.475452Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.476512Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.476937Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.480362Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T19:43:19.481286Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T19:43:19.692287Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.693616Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.696584Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T19:43:19.858644Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.860262Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.863346Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T19:43:19.974817Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.976548Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:19.979411Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T19:43:20.040915Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.043841Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.046858Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T19:43:20.258949Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.259083Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.260751Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.261189Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.263942Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T19:43:20.264693Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T19:43:20.293364Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.293477Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.294985Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.295468Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.298144Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T19:43:20.299363Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T19:43:20.327822Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.329518Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.331589Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.332994Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T19:43:20.333657Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.336374Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T19:43:20.350262Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.351658Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.354486Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T19:43:20.383809Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.384930Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.387891Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T19:43:20.417087Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.418628Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.421804Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T19:43:20.434781Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.436158Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.438727Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T19:43:20.500306Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.500451Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.501796Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.502230Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.505729Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T19:43:20.506679Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T19:43:20.617189Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.618303Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.621090Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T19:43:20.650598Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.652307Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.655567Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T19:43:20.716974Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.718589Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.722392Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T19:43:20.783310Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.784830Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:20.788129Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T19:43:21.149889Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.151088Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.154259Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T19:43:21.215906Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.218237Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.221115Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T19:43:21.282784Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.285139Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.287967Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T19:43:21.349463Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.350533Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.353744Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T19:43:21.415001Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.416060Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.419456Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T19:43:21.480487Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.481537Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.484229Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T19:43:21.545643Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.546628Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.550150Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T19:43:21.661104Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.661182Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.662075Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.662343Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.665288Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T19:43:21.666031Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T19:43:21.695252Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.695360Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.696492Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.696859Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.700368Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T19:43:21.701446Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T19:43:21.761902Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.763338Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.765611Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.766504Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.766693Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T19:43:21.769150Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T19:43:21.830960Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.831922Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:21.835307Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T19:43:22.147225Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.148225Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.151014Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T19:43:22.212505Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.213474Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.216635Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T19:43:22.327938Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.329517Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.332373Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T19:43:22.393810Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.394038Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.395160Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.395586Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.398779Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T19:43:22.399751Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T19:43:22.427953Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.429202Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.432060Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T19:43:22.461408Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.463215Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.463566Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.465453Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.468397Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T19:43:22.469466Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T19:43:22.529800Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.530603Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.533352Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T19:43:22.594896Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.595848Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.598920Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T19:43:22.760471Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.761768Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.764518Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T19:43:22.826002Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.827085Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.829582Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T19:43:22.830784Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.830867Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.831876Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.832278Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.835308Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T19:43:22.836241Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T19:43:22.864426Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.864514Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.865527Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.865818Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.868947Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T19:43:22.869861Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T19:43:22.930653Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.931835Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.934927Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T19:43:22.996308Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:22.997399Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.000294Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T19:43:23.161948Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.163357Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.166291Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T19:43:23.227668Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.228747Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.231765Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:23.343354Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.344356Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.347135Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T19:43:23.408630Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.409653Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.413092Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T19:43:23.441716Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.442798Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.445429Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T19:43:23.458909Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.459855Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.462574Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T19:43:23.491985Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.493118Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.496506Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T19:43:23.557755Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.557883Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.558969Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.559500Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.562514Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T19:43:23.563574Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T19:43:23.625464Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.626548Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.629787Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T19:43:23.841132Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.842315Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.845392Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T19:43:23.906646Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.907599Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.910529Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T19:43:23.939694Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.940699Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:23.943225Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T19:43:24.004822Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.005931Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.008816Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T19:43:24.070208Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.071175Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.073880Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T19:43:24.103221Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.104118Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.106775Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T19:43:24.168269Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.169227Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.171887Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T19:43:24.283516Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.284247Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.286820Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T19:43:24.316259Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.317091Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.320269Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T19:43:24.324736Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.325374Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.327858Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T19:43:24.357492Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.358155Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.360798Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:24.422461Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.423105Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.426009Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T19:43:24.487371Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.488286Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.491615Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T19:43:24.553220Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.554123Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.557366Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T19:43:24.618496Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.883632Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.884234Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.886701Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T19:43:24.948457Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.980570Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.981352Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T19:43:24.984176Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T19:43:25.045533Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.110025Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.110834Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.113814Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T19:43:25.175039Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.490260Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.491183Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.493934Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T19:43:25.523421Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.888394Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.889122Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.892199Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T19:43:25.921135Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.985429Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.985523Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.986193Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.986502Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T19:43:25.989257Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T19:43:26.022594Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T19:43:26.051322Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.051404Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.051743Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.051942Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.052304Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.052759Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.056653Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T19:43:26.057416Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T19:43:26.059608Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T19:43:26.085585Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.085659Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.085688Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.085966Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.086380Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.088911Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T19:43:26.089804Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T19:43:26.150593Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.150699Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.150982Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T19:43:26.153676Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T19:43:26.182900Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T19:43:28.952401Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T19:43:37.178309Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T19:43:37.178309Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] 
[2026-06-04T19:43:37.178309Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T19:43:37.178400Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] 
[2026-06-04T19:43:37.178408Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T19:43:37.178416Z] [nf-7075eb200d51a6e114b4fbd8b28fa112-a79f6-b624w] [665_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec