Work Directory

Task
DAQ:BAM_POSTDEDUP_QC:SEQTOOL (HCC1395_BL)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/fc0cef49372e99d11cb80d8bb8ee0e

Files (72)

Name Size Modified
.command.begin 6 bytes Jun 04, 2026 12:40 PM
.command.err 883 bytes Jun 04, 2026 12:41 PM
.command.log 17.1 KB Jun 04, 2026 12:41 PM
.command.out 13.8 KB Jun 04, 2026 12:41 PM
.command.run 17.1 KB Jun 04, 2026 12:38 PM
.command.sh 1.4 KB Jun 04, 2026 12:38 PM
.command.trace 269 bytes Jun 04, 2026 12:41 PM
.command.yaml 3.5 KB Jun 04, 2026 12:38 PM
.exitcode 1 byte Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/HCC1395_BL.md.depth.gz 86.5 MB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/HCC1395_BL.md.depth.gz.tbi 575.4 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/HCC1395_BL.md.depth.png 15.3 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/HCC1395_BL.md.depth_hist.tsv 10.6 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/HCC1395_BL.md.noise_summary.tsv 125 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/contamination.tsv 122 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv 350 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.altera_v3_targets_coding_postQC_hg38.bed.tsv 367 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.altera_v3_targets_noncoding_postQC_hg38.bed.tsv 371 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.altera_v3_targets_postQC_hg38.bed.tsv 371 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.foresight_clarity_targets_hg38.bed.tsv 366 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.tsv 372 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv 372 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/depth_stats.xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed.tsv 372 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/fragsize.fragsize.png 21.6 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/fragsize.fragsize.table 292 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/full_bed.bed 4.6 MB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.FINAL_hotspot_list_07302025_hg38_sorted.bed.png 34.0 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.altera_v3_targets_coding_postQC_hg38.bed.png 42.8 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.altera_v3_targets_noncoding_postQC_hg38.bed.png 44.6 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.altera_v3_targets_postQC_hg38.bed.png 43.3 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.foresight_clarity_targets_hg38.bed.png 43.1 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.png 46.9 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.png 45.7 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias.xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed.png 46.4 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv 432 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.altera_v3_targets_coding_postQC_hg38.bed.tsv 519 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.altera_v3_targets_noncoding_postQC_hg38.bed.tsv 529 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.altera_v3_targets_postQC_hg38.bed.tsv 524 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.foresight_clarity_targets_hg38.bed.tsv 494 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.tsv 524 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv 524 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/gc_bias_qc.xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed.tsv 514 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/qc_complete.txt 28 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv 560 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.altera_v3_targets_coding_postQC_hg38.bed.tsv 568 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.altera_v3_targets_noncoding_postQC_hg38.bed.tsv 570 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.altera_v3_targets_postQC_hg38.bed.tsv 570 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.foresight_clarity_targets_hg38.bed.tsv 566 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.tsv 569 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv 570 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/read_qc.xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed.tsv 569 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv 1.9 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.altera_v3_targets_coding_postQC_hg38.bed.tsv 238.2 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.altera_v3_targets_noncoding_postQC_hg38.bed.tsv 263.6 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.altera_v3_targets_postQC_hg38.bed.tsv 337.0 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.foresight_clarity_targets_hg38.bed.tsv 51.5 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.tsv 5.0 MB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv 4.8 MB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/reads_per_target.xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed.tsv 6.5 MB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/saturation_plot.png 41.7 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/saturation_qc.tsv 53 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.FINAL_hotspot_list_07302025_hg38_sorted.bed.tsv 68 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.altera_v3_targets_coding_postQC_hg38.bed.tsv 70 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.altera_v3_targets_noncoding_postQC_hg38.bed.tsv 73 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.altera_v3_targets_postQC_hg38.bed.tsv 63 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.foresight_clarity_targets_hg38.bed.tsv 63 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.tsv 127 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv 107 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL.md/total_base_counts.xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed.tsv 155 bytes Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL_basic_stats.tsv 1.3 KB Jun 04, 2026 12:41 PM
HCC1395_BL/HCC1395_BL_full_basic_stats.tsv 4.9 KB Jun 04, 2026 12:41 PM
versions.yml 49 bytes Jun 04, 2026 12:41 PM