mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kibfl8_z because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:06,682 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:07,788 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:08,018 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:09,402 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:09,712 - cnv_pipe.batch.run_model - INFO - Processing cluster 647 with 194 probes
2026-06-04 19:47:10,236 - cnv_pipe.batch.run_model.cluster647 - INFO - Child process started for cluster 647 with 194 probes
2026-06-04 19:48:29,745 - cnv_pipe.batch.run_model.cluster647 - INFO - Child process finished cluster 647. Wrote cluster_647_samples.csv and cluster_647_params.csv
2026-06-04 19:48:29,748 - cnv_pipe.batch.run_model - INFO - Cluster 647 finished in 80.04 seconds. Status: SUCCESS