mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-olmy9ckw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:09,655 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:10,713 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:10,942 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:12,291 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:12,569 - cnv_pipe.batch.run_model - INFO - Processing cluster 653 with 166 probes
2026-06-04 19:47:13,077 - cnv_pipe.batch.run_model.cluster653 - INFO - Child process started for cluster 653 with 166 probes
2026-06-04 19:48:18,422 - cnv_pipe.batch.run_model.cluster653 - INFO - Child process finished cluster 653. Wrote cluster_653_samples.csv and cluster_653_params.csv
2026-06-04 19:48:18,424 - cnv_pipe.batch.run_model - INFO - Cluster 653 finished in 65.85 seconds. Status: SUCCESS