mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cvavaxjx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:47:01,120 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:47:02,198 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:47:02,443 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:47:03,797 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:47:04,098 - cnv_pipe.batch.run_model - INFO - Processing cluster 613 with 198 probes
2026-06-04 19:47:04,598 - cnv_pipe.batch.run_model.cluster613 - INFO - Child process started for cluster 613 with 198 probes
2026-06-04 19:48:23,276 - cnv_pipe.batch.run_model.cluster613 - INFO - Child process finished cluster 613. Wrote cluster_613_samples.csv and cluster_613_params.csv
2026-06-04 19:48:23,278 - cnv_pipe.batch.run_model - INFO - Cluster 613 finished in 79.18 seconds. Status: SUCCESS