Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/c652cf77c735366d9ccfe209f12450/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/c652cf77c735366d9ccfe209f12450/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/annotation-cache/vep_cache/113_GRCh38
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/4c8862d1ea378ab2e2d33ce69dec44/negative_somatic_control_2.snv_indel.phased.vcf.gz
==> STAGING COMPLETE (5 inputs)
ls: *.tab.gz: No such file or directory
ls: *.json.gz: No such file or directory