File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/1db3b0c034a9c92fa862c816f35eeb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8tihcvzq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:19,212 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:20,092 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:20,288 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:21,361 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:21,600 - cnv_pipe.batch.run_model - INFO - Processing cluster 1051 with 192 probes
2026-06-04 19:48:22,051 - cnv_pipe.batch.run_model.cluster1051 - INFO - Child process started for cluster 1051 with 192 probes
2026-06-04 19:49:23,498 - cnv_pipe.batch.run_model.cluster1051 - INFO - Child process finished cluster 1051. Wrote cluster_1051_samples.csv and cluster_1051_params.csv
2026-06-04 19:49:23,500 - cnv_pipe.batch.run_model - INFO - Cluster 1051 finished in 61.90 seconds. Status: SUCCESS