cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_coding_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_altera_v3_targets_coding_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:167000001, elapsed 0.0s, est remaining 0.6s, peak mem 97MB, user 0.1s, sys 0.6s, output queue size 26
progress 10% @chr2:80000001, elapsed 0.1s, est remaining 0.6s, peak mem 97MB, user 0.2s, sys 1.4s, output queue size 21
progress 15% @chr2:213000001, elapsed 0.1s, est remaining 0.5s, peak mem 97MB, user 0.2s, sys 2.1s, output queue size 23
progress 20% @chr3:150000001, elapsed 0.1s, est remaining 0.5s, peak mem 97MB, user 0.3s, sys 3.0s, output queue size 20
progress 25% @chr4:118000001, elapsed 0.1s, est remaining 0.4s, peak mem 97MB, user 0.4s, sys 3.7s, output queue size 39
progress 30% @chr5:87000001, elapsed 0.2s, est remaining 0.4s, peak mem 97MB, user 0.5s, sys 4.5s, output queue size 8
progress 35% @chr6:54000001, elapsed 0.2s, est remaining 0.4s, peak mem 97MB, user 0.5s, sys 5.4s, output queue size 35
progress 40% @chr7:54000001, elapsed 0.2s, est remaining 0.4s, peak mem 97MB, user 0.6s, sys 6.2s, output queue size 6
progress 45% @chr8:56000001, elapsed 0.3s, est remaining 0.3s, peak mem 97MB, user 0.7s, sys 7.0s, output queue size 26
progress 50% @chr9:73000001, elapsed 0.3s, est remaining 0.3s, peak mem 97MB, user 0.7s, sys 7.9s, output queue size 19
progress 55% @chr10:96000001, elapsed 0.3s, est remaining 0.3s, peak mem 97MB, user 0.8s, sys 8.8s, output queue size 7
progress 60% @chr11:122000001, elapsed 0.4s, est remaining 0.2s, peak mem 97MB, user 0.8s, sys 9.7s, output queue size 9
progress 65% @chr13:15000001, elapsed 0.4s, est remaining 0.2s, peak mem 97MB, user 0.9s, sys 10.7s, output queue size 2
progress 70% @chr14:60000001, elapsed 0.4s, est remaining 0.2s, peak mem 97MB, user 0.9s, sys 11.6s, output queue size 3
progress 75% @chr16:12000001, elapsed 0.5s, est remaining 0.2s, peak mem 97MB, user 0.9s, sys 12.6s, output queue size 7
progress 80% @chr18:3000001, elapsed 0.5s, est remaining 0.1s, peak mem 97MB, user 0.9s, sys 13.5s, output queue size 8
progress 85% @chr20:24000001, elapsed 0.5s, est remaining 0.1s, peak mem 97MB, user 1.0s, sys 14.4s, output queue size 8
progress 90% @chrX:30000001, elapsed 0.6s, est remaining 0.1s, peak mem 124MB, user 1.4s, sys 15.0s, output queue size 114
progress 95% @chrY:33000001, elapsed 0.6s, est remaining 0.0s, peak mem 136MB, user 1.8s, sys 15.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 163MB, user 2.8s, sys 17.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813899
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.239 user 8.404 sys 10.320 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.001 sys 0.929 real
idle: 82 calls 0.006 user 0.023 sys 39.127 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 171331584 mem 2.983 user 17.658 sys 2.099 real