File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/226151df974293b96fed214a43be73/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-boh4rfps because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:59,361 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:49:00,318 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:49:00,515 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:49:01,590 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:49:01,794 - cnv_pipe.batch.run_model - INFO - Processing cluster 1269 with 194 probes
2026-06-04 19:49:02,204 - cnv_pipe.batch.run_model.cluster1269 - INFO - Child process started for cluster 1269 with 194 probes
2026-06-04 19:50:18,194 - cnv_pipe.batch.run_model.cluster1269 - INFO - Child process finished cluster 1269. Wrote cluster_1269_samples.csv and cluster_1269_params.csv
2026-06-04 19:50:18,196 - cnv_pipe.batch.run_model - INFO - Cluster 1269 finished in 76.40 seconds. Status: SUCCESS