File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/c49ce172a3626a4341de346add0c9f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jk6p17v8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:33,273 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:34,146 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:34,322 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:35,477 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:35,546 - cnv_pipe.batch.run_model - INFO - Processing cluster 1122 with 197 probes
2026-06-04 19:48:35,950 - cnv_pipe.batch.run_model.cluster1122 - INFO - Child process started for cluster 1122 with 197 probes
2026-06-04 19:49:37,484 - cnv_pipe.batch.run_model.cluster1122 - INFO - Child process finished cluster 1122. Wrote cluster_1122_samples.csv and cluster_1122_params.csv
2026-06-04 19:49:37,485 - cnv_pipe.batch.run_model - INFO - Cluster 1122 finished in 61.94 seconds. Status: SUCCESS