File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/7f7aa8755900ed2f6e6032b1505d14/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9ul_yssg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 19:48:12,184 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 19:48:12,999 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 19:48:13,170 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 19:48:14,078 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 19:48:14,240 - cnv_pipe.batch.run_model - INFO - Processing cluster 1016 with 190 probes
2026-06-04 19:48:14,623 - cnv_pipe.batch.run_model.cluster1016 - INFO - Child process started for cluster 1016 with 190 probes
2026-06-04 19:49:14,227 - cnv_pipe.batch.run_model.cluster1016 - INFO - Child process finished cluster 1016. Wrote cluster_1016_samples.csv and cluster_1016_params.csv
2026-06-04 19:49:14,229 - cnv_pipe.batch.run_model - INFO - Cluster 1016 finished in 59.99 seconds. Status: SUCCESS