control_type,sample_id,variant_type,qc_metric_name,qc_value
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,5.2000
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,52
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,10
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1369
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25673
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,4.4167
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,53
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,12
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1365
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25704
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,5.5556
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,50
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,9
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1366
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25633
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,5.3333
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,48
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,9
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1347
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25652
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,3
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.02750419346202934
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.041699592024087906
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.03240660671144724
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.01997261680662632
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.037309019960865136
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,178
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,23.03
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,41
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,5
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,1
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,5
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.02563791606811753
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.06223834678530693
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.03380108010023832
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.023869195953011513
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.041964244132359114
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,178
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,22.47
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,40
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,2
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,0
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,7
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.036791390482357994
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.06807906180620193
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.04371506236493587
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.03552767261862755
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.05063873424751375
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,177
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,14.12
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,25
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,3
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,2
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,14
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.045684706310907056
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.0831565111875534
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.05845422744750976
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.030927274376153946
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.07122374858411247
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,178
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,20.22
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,36
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,8
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,2
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,3
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.02120714843800325
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.03433562442660332
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.026245109364390375
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.014768386259675026
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.031283070290777495
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,178
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,23.03
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,41
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,163343;177678;13983;376002;13655
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,5
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,1
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,5
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.020015799604726586
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.047888558357954025
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.028641186095774172
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.012920697219669819
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.037266572586821756
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,178
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,22.47
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,40
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,13983;376002;13655;163343;177678
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,2
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,7
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.033050998227725614
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.06920773535966873
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.04273972809314728
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.021612025797367096
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.052428457958568944
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,177
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,14.12
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,25
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,13655;13983;163343;177678;376002
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,3
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,2
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,14
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.03907785320955333
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.0790727287530899
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.05005200821906328
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.025883032009005547
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.06102616322857324
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,178
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,20.22
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,36
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,13655;13983;376002;163343;177678
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,8
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,2
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0