mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lqf4wyxx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:40,093 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:40,995 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:41,171 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:42,165 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:42,337 - cnv_pipe.batch.run_model - INFO - Processing cluster 54 with 199 probes
2026-06-05 03:30:42,718 - cnv_pipe.batch.run_model.cluster54 - INFO - Child process started for cluster 54 with 199 probes
2026-06-05 03:31:43,294 - cnv_pipe.batch.run_model.cluster54 - INFO - Child process finished cluster 54. Wrote cluster_54_samples.csv and cluster_54_params.csv
2026-06-05 03:31:43,296 - cnv_pipe.batch.run_model - INFO - Cluster 54 finished in 60.96 seconds. Status: SUCCESS